RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1180292", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1180292 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26755488 26755488 PRJNA1180292_P_NODE_10161_length_248_cov_0.891429_g10029_i0 PRJNA1180292 10161 248 0.891429 2.21074392 Fidelibacterota bacterium 2026760 Bacteria Bacteria 69.7 5.86e-12   NR MCJ7802182.1 2026760 g10029 i0 81.1 1.34274193548387 37 7 44.8 0 247 137 234 270 MCJ7802182.1 NUDIX hydrolase [Fidelibacterota bacterium] diamond 333 69.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31051947 31051947 PRJNA1180292_P_NODE_11495_length_245_cov_0.906977_g11363_i0 PRJNA1180292 11495 245 0.906977 2.22209365 Fidelibacterota bacterium 2026760 Bacteria Bacteria 80.5 1.65e-15   NR MBC8401063.1 2026760 g11363 i0 43.6 2.80408163265306 78 41 95.5 1 236 3 75 149 MBC8401063.1 glycosyltransferase family 4 protein [Fidelibacterota bacterium] diamond 687 80.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;