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contig_metadata

6 rows where bioproject = "PRJNA1180292", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA1180292 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2868640 2868640 PRJNA1180292_P_NODE_11123_length_246_cov_0.901734_g10991_i0 PRJNA1180292 11123 246 0.901734 2.21826564 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 141 8.72e-40   NR MBW7863135.1 2030809 g10991 i0 80.5 1 82 16 100 0 1 246 157 238 MBW7863135.1 di-trans,poly-cis-decaprenylcistransferase [Candidatus Hydrogenedentota bacterium] diamond 246 141 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
6695798 6695798 PRJNA1180292_P_NODE_8146_length_253_cov_0.866667_g8014_i0 PRJNA1180292 8146 253 0.866667 2.19266751 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 161 9.42e-44   NR MBX7255073.1 2030809 g8014 i0 91.6 0.984189723320158 83 7 98.4 0 251 3 831 913 MBX7255073.1 amino acid adenylation domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 249 161 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
26679692 26679692 PRJNA1180292_P_NODE_10541_length_247_cov_0.896552_g10409_i0 PRJNA1180292 10541 247 0.896552 2.21448344 Pseudomonadati 3379134 Bacteria Bacteria 126 7.019999999999998e-32   NR MCX5772159.1 2030809 g10409 i0 72 5.97570850202429 82 23 99.6 0 2 247 302 383 MCX5772159.1 response regulator [Candidatus Hydrogenedentota bacterium] diamond 1476 126 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29030363 29030363 PRJNA1180292_P_NODE_10708_length_247_cov_0.896552_g10576_i0 PRJNA1180292 10708 247 0.896552 2.21448344 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 69.3 1.13e-11   NR HQM51410.1 2030809 g10576 i0 81.3 0.388663967611336 32 6 38.9 0 247 152 280 311 HQM51410.1 DUF1559 domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 96 69.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29282542 29282542 PRJNA1180292_P_NODE_8289_length_252_cov_0.871508_g8157_i0 PRJNA1180292 8289 252 0.871508 2.19620016 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 73.9 2.23e-15   NR MBI2434612.1 2030809 g8157 i0 56.7 0.714285714285714 60 26 71.4 0 70 249 1 60 MBI2434612.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 180 73.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29661180 29661180 PRJNA1180292_P_NODE_6210_length_282_cov_1.248804_g6078_i0 PRJNA1180292 6210 282 1.248804 3.52162728 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 50.4 2.16e-5   NR NLV46676.1 2030809 g6078 i0 47.4 0.404255319148936 38 20 40.4 0 21 134 82 119 NLV46676.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 114 50.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;