RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1180292", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1180292 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27798916 27798916 PRJNA1180292_P_NODE_10584_length_247_cov_0.896552_g10452_i0 PRJNA1180292 10584 247 0.896552 2.21448344 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 80.9 1.43e-15   NR MCD4819348.1 2030808 g10452 i0 47.5 0.97165991902834 80 42 97.2 0 6 245 513 592 MCD4819348.1 ABC transporter permease [Candidatus Cloacimonadota bacterium] diamond 240 80.9 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
29692857 29692857 PRJNA1180292_P_NODE_9450_length_250_cov_0.881356_g9318_i0 PRJNA1180292 9450 250 0.881356 2.20339 Candidatus Cloacimonetes bacterium 4572_55 1971726 Bacteria Bacteria 111 3.1200000000000003e-26   NR OQY27474.1 1971726 g9318 i0 67.1 0.948 79 24 94.8 1 3 239 226 302 OQY27474.1 MAG: hypothetical protein B6244_10500 [Candidatus Cloacimonetes bacterium 4572_55] diamond 237 111 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonetes bacterium 4572_55

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;