RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1180292", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1180292 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27483019 27483019 PRJNA1180292_P_NODE_12443_length_243_cov_0.917647_g12311_i0 PRJNA1180292 12443 243 0.917647 2.22988221 Minisyncoccota bacterium 2053589 Bacteria Bacteria 135 5.63e-35   NR MFA4998569.1 2053589 g12311 i0 83.8 2.96296296296296 80 13 98.8 0 242 3 399 478 MFA4998569.1 ATPase, T2SS/T4P/T4SS family [Candidatus Paceibacterota bacterium] diamond 720 135 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28777452 28777452 PRJNA1180292_P_NODE_7887_length_253_cov_0.866667_g7755_i0 PRJNA1180292 7887 253 0.866667 2.19266751 Minisyncoccota bacterium 2053589 Bacteria Bacteria 118 3.37e-29   NR MFA6355081.1 2053589 g7755 i0 68.7 3.93675889328063 83 26 98.4 0 3 251 309 391 MFA6355081.1 trypsin-like peptidase domain-containing protein [Candidatus Paceibacterota bacterium] diamond 996 118 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;