RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1180292", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woeseibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1180292 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29219735 29219735 PRJNA1180292_P_NODE_8909_length_251_cov_0.876404_g8777_i0 PRJNA1180292 8909 251 0.876404 2.19977404 Candidatus Woesebacteria bacterium RIFCSPHIGHO2_ 2026804 Bacteria Bacteria 73.6 1.88e-13   NR OGM26341.1 1802496 g8777 i0 51.6 0.741035856573705 62 30 74.1 0 15 200 110 171 OGM26341.1 MAG: hypothetical protein A2627_00060 [Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_28] diamond 186 73.6 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_28
30577503 30577503 PRJNA1180292_P_NODE_8073_length_253_cov_0.866667_g7941_i0 PRJNA1180292 8073 253 0.866667 2.19266751 Candidatus Woesebacteria bacterium GW2 2026804 Bacteria Bacteria 134 1.83e-34   NR KKQ55720.1 1618583 g7941 i0 76.8 0.972332015810277 82 19 97.2 0 249 4 638 719 KKQ55720.1 MAG: hypothetical protein US75_C0015G0016 [Candidatus Woesebacteria bacterium GW2011_GWC1_38_13] diamond 246 134 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWC1_38_13
32411877 32411877 PRJNA1180292_P_NODE_11659_length_245_cov_0.906977_g11527_i0 PRJNA1180292 11659 245 0.906977 2.22209365 Candidatus Woesebacteria bacterium RBG_16_36_11 1802481 Bacteria Bacteria 150 5.4799999999999996e-42   NR OGM11707.1 1802481 g11527 i0 85.2 0.991836734693878 81 12 99.2 0 2 244 115 195 OGM11707.1 MAG: hypothetical protein A2W13_02475 [Candidatus Woesebacteria bacterium RBG_16_36_11] diamond 243 150 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium RBG_16_36_11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;