RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1180292", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1180292 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27830283 27830283 PRJNA1180292_P_NODE_10804_length_247_cov_0.896552_g10672_i0 PRJNA1180292 10804 247 0.896552 2.21448344 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 126 2.17e-33   NR HMT18454.1 2026720 g10672 i0 73.2 0.995951417004049 82 22 99.6 0 247 2 12 93 HMT18454.1 mechanosensitive ion channel family protein [Candidatus Saccharibacteria bacterium] diamond 246 126 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30009214 30009214 PRJNA1180292_P_NODE_9711_length_249_cov_0.886364_g9579_i0 PRJNA1180292 9711 249 0.886364 2.20704636 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 90.5 4.29e-19   NR MDB5169784.1 2026720 g9579 i0 57.3 0.987951807228916 82 33 98.8 1 249 4 123 202 MDB5169784.1 class SAM-dependent methyltransferase [Candidatus Saccharibacteria bacterium] diamond 246 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;