RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1180292", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1180292 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29629667 29629667 PRJNA1180292_P_NODE_12150_length_244_cov_0.912281_g12018_i0 PRJNA1180292 12150 244 0.912281 2.22596564 Candidatus Bipolaricaulis sp. 2814139 Bacteria Bacteria 148 8.54e-44   NR MDD5263833.1 2814139 g12018 i0 93.8 0.995901639344262 81 5 99.6 0 243 1 12 92 MDD5263833.1 hypothetical protein [Candidatus Bipolaricaulis sp.] diamond 243 148 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia Candidatus Bipolaricaulales Candidatus Bipolaricaulaceae Candidatus Bipolaricaulis Candidatus Bipolaricaulis sp.
30420106 30420106 PRJNA1180292_P_NODE_8433_length_252_cov_0.871508_g8301_i0 PRJNA1180292 8433 252 0.871508 2.19620016 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 153 4.1e-43   NR MCX6092153.1 2306012 g8301 i0 95.2 1.97619047619048 83 4 98.8 0 249 1 106 188 MCX6092153.1 trypsin-like peptidase domain-containing protein [Candidatus Bipolaricaulota bacterium] diamond 498 153 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
32221959 32221959 PRJNA1180292_P_NODE_9078_length_251_cov_0.876404_g8946_i0 PRJNA1180292 9078 251 0.876404 2.19977404 Candidatus Bipolaricaulis sp. 2814139 Bacteria Bacteria 116 2.65e-29   NR MDD4903325.1 2814139 g8946 i0 70.1 1.82868525896414 77 22 90.8 1 7 234 199 275 MDD4903325.1 helix-turn-helix domain-containing protein [Candidatus Bipolaricaulis sp.] diamond 459 116 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia Candidatus Bipolaricaulales Candidatus Bipolaricaulaceae Candidatus Bipolaricaulis Candidatus Bipolaricaulis sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;