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contig_metadata

32 rows where bioproject = "PRJNA1180292", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 32 ✖

tax_clade 1

  • Amoebozoa · 32 ✖

bioproject 1

  • PRJNA1180292 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5420906 5420906 PRJNA1180292_P_NODE_10445_length_247_cov_1.787356_g10313_i0 PRJNA1180292 10445 247 1.787356 4.41476932 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 126 5.06e-35   NR XP_004356806.1 1257118 g10313 i0 86.8 49.7004048582996 68 9 82.6 0 5 208 82 149 XP_004356806.1 mago nashi protein [Acanthamoeba castellanii str. Neff] diamond 12276 126 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9245704 9245704 PRJNA1180292_P_NODE_10908_length_246_cov_1.745665_g10776_i0 PRJNA1180292 10908 246 1.745665 4.2943359 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 105 5.16e-25   NR XP_004342301.1 1257118 g10776 i0 68.8 1.52439024390244 64 20 78 0 53 244 30 93 XP_004342301.1 lipoyltransferase and lipoateprotein ligase [Acanthamoeba castellanii str. Neff] diamond 375 105 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14346852 14346852 PRJNA1180292_P_NODE_10472_length_247_cov_1.298851_g10340_i0 PRJNA1180292 10472 247 1.298851 3.20816197 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 115 4.54e-28   NR XP_004352083.1 1257118 g10340 i0 66.7 2.91497975708502 81 27 98.4 0 245 3 328 408 XP_004352083.1 serine hydroxymethyltransferase [Acanthamoeba castellanii str. Neff] diamond 720 116 0.991379310344828 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15620632 15620632 PRJNA1180292_P_NODE_2573_length_423_cov_1.968571_g2441_i0 PRJNA1180292 2573 423 1.968571 8.32705533 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 318 3.64e-82   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g2441 i0 85.276 43.9503546099291 326 28 76 14 102 423 1480 1789 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 18591 318 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
23270025 23270025 PRJNA1180292_P_NODE_3759_length_354_cov_1.099644_g3627_i0 PRJNA1180292 3759 354 1.099644 3.89273976 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 164 4.6500000000000004e-49   NR XP_004352065.1 1257118 g3627 i0 69.5 4.03389830508475 118 36 100 0 354 1 41 158 XP_004352065.1 ribosomal protein S7e, putative [Acanthamoeba castellanii str. Neff] diamond 1428 164 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23270086 23270086 PRJNA1180292_P_NODE_9359_length_250_cov_0.881356_g9227_i0 PRJNA1180292 9359 250 0.881356 2.20339 root 1 Root_unresolved Root_unresolved 135 3.95e-36   NR XP_004353683.1 1257118 g9227 i0 78.3 6.924 83 18 99.6 0 250 2 67 149 XP_004353683.1 acetylCoA acetyltransferase, mitochondrial, putative [Acanthamoeba castellanii str. Neff] diamond 1731 135 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24543879 24543879 PRJNA1180292_P_NODE_6120_length_283_cov_1.485714_g5988_i0 PRJNA1180292 6120 283 1.485714 4.20457062 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 76.3 8.99e-14   NR XP_004367914.1 1257118 g5988 i0 41.7 1.14487632508834 108 39 92.2 4 281 21 72 176 XP_004367914.1 transducin (beta) family 1X-linked, putative [Acanthamoeba castellanii str. Neff] diamond 324 76.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26755497 26755497 PRJNA1180292_P_NODE_4481_length_327_cov_1.838583_g4349_i0 PRJNA1180292 4481 327 1.838583 6.01216641 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 162 3.4199999999999996e-48   NR XP_004358287.1 1257118 g4349 i0 76.1 2 109 26 100 0 327 1 4 112 XP_004358287.1 eukaryotic ribosomal protein L18, putative [Acanthamoeba castellanii str. Neff] diamond 654 162 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27281107 27281107 PRJNA1180292_P_NODE_13143_length_242_cov_0.923077_g13011_i0 PRJNA1180292 13143 242 0.923077 2.23384634 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 89.4 1.32e-18   NR AGK89943.1 1257118 g13011 i0 53.8 2.81404958677686 78 35 95.5 1 237 7 236 313 AGK89943.1 bi-functional phosphoribosylanthranilate isomerase/shikimate dehydrogenase protein, partial [Acanthamoeba castellanii str. Neff] diamond 681 90.1 0.992230854605993 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27767408 27767408 PRJNA1180292_P_NODE_4104_length_341_cov_1.164179_g3972_i0 PRJNA1180292 4104 341 1.164179 3.96985039 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 137 2.05e-38   NR XP_004358287.1 1257118 g3972 i0 67.3 0.86217008797654 98 32 86.2 0 296 3 1 98 XP_004358287.1 eukaryotic ribosomal protein L18, putative [Acanthamoeba castellanii str. Neff] diamond 294 137 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27767411 27767411 PRJNA1180292_P_NODE_8564_length_252_cov_0.871508_g8432_i0 PRJNA1180292 8564 252 0.871508 2.19620016 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 79.7 3.93e-15   NR XP_004333952.1 1257118 g8432 i0 42.7 0.976190476190476 82 47 97.6 0 248 3 261 342 XP_004333952.1 TBC domain containing protein [Acanthamoeba castellanii str. Neff] diamond 246 79.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27988227 27988227 PRJNA1180292_P_NODE_10665_length_247_cov_0.896552_g10533_i0 PRJNA1180292 10665 247 0.896552 2.21448344 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57 3.38e-7   NR XP_004334824.1 1257118 g10533 i0 35.8 0.983805668016194 81 50 98.4 1 1 243 106 184 XP_004334824.1 uncharacterized protein ACA1_093570 [Acanthamoeba castellanii str. Neff] diamond 243 57 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28240586 28240586 PRJNA1180292_P_NODE_4466_length_328_cov_1.074510_g4334_i0 PRJNA1180292 4466 328 1.07451 3.5243928 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 141 2.05e-36   NR XP_004338370.1 1257118 g4334 i0 64.8 0.98780487804878 108 37 97.9 1 328 8 477 584 XP_004338370.1 uncharacterized protein ACA1_204440 [Acanthamoeba castellanii str. Neff] diamond 324 141 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28607231 28607231 PRJNA1180292_P_NODE_6007_length_285_cov_3.165094_g5875_i0 PRJNA1180292 6007 285 3.165094 9.0205179 root 1 Root_unresolved Root_unresolved 58.5 5.8e-9   NR XP_004353767.1 1257118 g5875 i0 46.7 1.22105263157895 60 32 63.2 0 63 242 10 69 XP_004353767.1 uncharacterized protein ACA1_272620 [Acanthamoeba castellanii str. Neff] diamond 348 58.9 0.99320882852292 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28638998 28638998 PRJNA1180292_P_NODE_1887_length_498_cov_1.343529_g1755_i0 PRJNA1180292 1887 498 1.343529 6.69077442 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.2 0.0192   NR XP_004338438.1 1257118 g1755 i0 32.9 1.37349397590361 76 49 45.8 1 228 1 78 151 XP_004338438.1 Peroxin 19 (Pex19), putative [Acanthamoeba castellanii str. Neff] diamond 684 46.6 0.991416309012876 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28935498 28935498 PRJNA1180292_P_NODE_5408_length_300_cov_1.374449_g5276_i0 PRJNA1180292 5408 300 1.374449 4.123347 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 119 3.6199999999999996e-32   NR 7SOG_A 5755 g5276 i0 57.6 0.92 92 38 92 1 277 2 3 93 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 276 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28935504 28935504 PRJNA1180292_P_NODE_9948_length_249_cov_0.886364_g9816_i0 PRJNA1180292 9948 249 0.886364 2.20704636 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.5 0.022   NR XP_004343970.1 1257118 g9816 i0 32.1 0.939759036144578 78 41 94 2 248 15 1986 2051 XP_004343970.1 uncharacterized protein ACA1_052580 [Acanthamoeba castellanii str. Neff] diamond 234 43.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28986370 28986370 PRJNA1180292_P_NODE_4028_length_343_cov_1.155556_g3896_i0 PRJNA1180292 4028 343 1.155556 3.96355708 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 1.06e-24   NR XP_004341586.1 1257118 g3896 i0 66.7 3.88338192419825 72 23 63 1 219 4 254 324 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 1332 107 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29711983 29711983 PRJNA1180292_P_NODE_6230_length_281_cov_1.514423_g6098_i0 PRJNA1180292 6230 281 1.514423 4.25552863 root 1 Root_unresolved Root_unresolved 63.5 2.32e-9   NR XP_004345807.1 1257118 g6098 i0 43.5 3.69395017793594 62 35 66.2 0 246 61 33 94 XP_004345807.1 cathepsin L, putative [Acanthamoeba castellanii str. Neff] diamond 1038 63.9 0.993740219092332 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29787746 29787746 PRJNA1180292_P_NODE_6831_length_270_cov_1.187817_g6699_i0 PRJNA1180292 6831 270 1.187817 3.2071059 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 54.7 3.14e-6   NR XP_004344711.1 1257118 g6699 i0 67.6 0.411111111111111 37 12 41.1 0 159 269 207 243 XP_004344711.1 uncharacterized protein ACA1_279500 [Acanthamoeba castellanii str. Neff] diamond 111 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29882857 29882857 PRJNA1180292_P_NODE_10771_length_247_cov_0.896552_g10639_i0 PRJNA1180292 10771 247 0.896552 2.21448344 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 74.3 2.98e-13   NR XP_004353532.1 1257118 g10639 i0 52.6 0.923076923076923 76 31 87.4 2 220 5 261 335 XP_004353532.1 type A von Willebrand factor (VWFA) domain containing protein [Acanthamoeba castellanii str. Neff] diamond 228 74.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30609186 30609186 PRJNA1180292_P_NODE_11513_length_245_cov_0.906977_g11381_i0 PRJNA1180292 11513 245 0.906977 2.22209365 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 44.3 0.0112   NR XP_004336072.1 1257118 g11381 i0 64.7 0.416326530612245 34 12 41.6 0 239 138 1157 1190 XP_004336072.1 DNA gyrase/topoisomerase IV, A subunit [Acanthamoeba castellanii str. Neff] diamond 102 44.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31177768 31177768 PRJNA1180292_P_NODE_12335_length_243_cov_1.111765_g12203_i0 PRJNA1180292 12335 243 1.111765 2.70158895 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 65.1 4.84e-10   NR XP_004351077.1 1257118 g12203 i0 42.5 0.987654320987654 80 45 97.5 1 3 239 22 101 XP_004351077.1 nuclear transport factor 2 (ntf2) domain containing protein [Acanthamoeba castellanii str. Neff] diamond 240 65.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31589396 31589396 PRJNA1180292_P_NODE_6296_length_280_cov_1.333333_g6164_i0 PRJNA1180292 6296 280 1.333333 3.7333324 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 85.1 3.72e-17   NR XP_004347733.1 1257118 g6164 i0 47.2 0.953571428571429 89 47 95.4 0 13 279 204 292 XP_004347733.1 Diacylglycerol acyltransferase, putative [Acanthamoeba castellanii str. Neff] diamond 267 85.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31639927 31639927 PRJNA1180292_P_NODE_6596_length_274_cov_1.343284_g6464_i0 PRJNA1180292 6596 274 1.343284 3.68059816 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 48.5 4.81e-4   NR XP_004348706.1 1257118 g6464 i0 51.1 0.875912408759124 47 23 51.5 0 271 131 338 384 XP_004348706.1 uncharacterized protein ACA1_126730 [Acanthamoeba castellanii str. Neff] diamond 240 48.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31683908 31683908 PRJNA1180292_P_NODE_10797_length_247_cov_0.896552_g10665_i0 PRJNA1180292 10797 247 0.896552 2.21448344 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.1 9.11e-12   NR XP_004341866.1 1257118 g10665 i0 43.4 1.0080971659919 83 39 99.6 2 246 1 134 209 XP_004341866.1 transmembrane 9 superfamily protein member 4, putative [Acanthamoeba castellanii str. Neff] diamond 249 70.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31747270 31747270 PRJNA1180292_P_NODE_6757_length_271_cov_1.469697_g6625_i0 PRJNA1180292 6757 271 1.469697 3.98287887 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 68.6 1.63e-11   NR XP_004340229.1 1257118 g6625 i0 47.8 5.91143911439114 92 42 97.4 2 8 271 13 102 XP_004340229.1 ribosomal protein L6e, putative [Acanthamoeba castellanii str. Neff] diamond 1602 68.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31778881 31778881 PRJNA1180292_P_NODE_10397_length_248_cov_0.891429_g10265_i0 PRJNA1180292 10397 248 0.891429 2.21074392 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.9 8.14e-16   NR XP_004341817.1 1257118 g10265 i0 75 0.629032258064516 52 13 62.9 0 158 3 11 62 XP_004341817.1 fructose-1,6-bisphosphatase, putative [Acanthamoeba castellanii str. Neff] diamond 156 80.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32095340 32095340 PRJNA1180292_P_NODE_2078_length_472_cov_1.150376_g1946_i0 PRJNA1180292 2078 472 1.150376 5.42977472 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 120 3.32e-28   NR XP_004337745.1 1257118 g1946 i0 47.8 1.73516949152542 136 68 86.4 1 1 408 798 930 XP_004337745.1 uncharacterized protein ACA1_379130 [Acanthamoeba castellanii str. Neff] diamond 819 120 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32285562 32285562 PRJNA1180292_P_NODE_5799_length_290_cov_1.078341_g5667_i0 PRJNA1180292 5799 290 1.078341 3.1271889 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 91.7 2.55e-20   NR XP_004340174.1 1257118 g5667 i0 48.4 0.962068965517241 93 46 96.2 2 286 8 83 173 XP_004340174.1 universal stress domain containing protein [Acanthamoeba castellanii str. Neff] diamond 279 91.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32853275 32853275 PRJNA1180292_P_NODE_9600_length_249_cov_1.136364_g9468_i0 PRJNA1180292 9600 249 1.136364 2.82954636 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 98.2 5.95e-22   NR XP_004336628.1 1257118 g9468 i0 56.6 1 83 36 100 0 249 1 283 365 XP_004336628.1 cation diffusion facilitator family transporter superfamily protein [Acanthamoeba castellanii str. Neff] diamond 249 98.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32884698 32884698 PRJNA1180292_P_NODE_11280_length_246_cov_0.901734_g11148_i0 PRJNA1180292 11280 246 0.901734 2.21826564 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.8 1.5000000000000002e-22   NR XP_004341586.1 1257118 g11148 i0 55.6 0.98780487804878 81 36 98.8 0 2 244 63 143 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 243 99.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;