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contig_metadata

3 rows where bioproject = "PRJNA1175041" and tax_superkingdom = "Archaea"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Archaea · 3 ✖

bioproject 1

  • PRJNA1175041 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29724465 29724465 PRJNA1175041_P_NODE_98890_length_247_cov_0.873563_g96022_i0 PRJNA1175041 98890 247 0.873563 2.15770061 archaeon 1906665 Archaea Archaea 79.7 4.17e-16   NR RYG64835.1 1906665 g96022 i0 49.4 1.0080971659919 83 39 97.2 2 240 1 23 105 RYG64835.1 MAG: hypothetical protein EON64_13170 [archaeon] diamond 249 79.7 1 Archaea               archaeon
30735648 30735648 PRJNA1175041_P_NODE_57854_length_387_cov_0.977707_g54986_i0 PRJNA1175041 57854 387 0.977707 3.78372609 Nanobdellota archaeon 2026764 Archaea Archaea 43.5 0.00823   NR MBU1103019.1 2026764 g54986 i0 34.5 0.426356589147287 55 33 42.6 1 375 211 13 64 MBU1103019.1 hypothetical protein [Nanoarchaeota archaeon] diamond 165 43.5 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32380233 32380233 PRJNA1175041_P_NODE_81379_length_290_cov_1.027650_g78511_i0 PRJNA1175041 81379 290 1.02765 2.980185 Desulfurococcales archaeon 2480821 Archaea Archaea 41.6 0.0399   NR MCE4620956.1 2480821 g78511 i0 35.5 0.641379310344828 62 37 61 1 239 63 6 67 MCE4620956.1 50S ribosomal protein L21e [Desulfurococcales archaeon] diamond 186 41.6 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales     Desulfurococcales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;