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contig_metadata

31 rows where bioproject = "PRJNA1175041" and tax_phylum = "Streptophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 31 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1175041 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1591969 1591969 PRJNA1175041_P_NODE_78602_length_298_cov_1.462222_g75734_i0 PRJNA1175041 78602 298 1.462222 4.35742156 Cucumis melo 3656 Plants Plants 542 1.35e-149   NTclustered gi|2316525201|ref|XR_007817403.1| 3656 g75734 i0 99.662 99.3288590604027 296 1 99 0 3 298 1834 2129 PREDICTED: Cucumis melo 28S ribosomal RNA (LOC127145675), rRNA blastn 29600 542 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
4144507 4144507 PRJNA1175041_P_NODE_98884_length_247_cov_0.873563_g96016_i0 PRJNA1175041 98884 247 0.873563 2.15770061 Jatropha curcas 180498 Plants Plants 178 3.53e-40   NTclustered gi|1173831830|ref|XM_012220887.2| 180498 g96016 i0 80.083 5.8502024291498 241 46 97 2 1 240 1313 1074 PREDICTED: Jatropha curcas DNA topoisomerase 1 (LOC105637432), transcript variant X1, mRNA blastn 1445 178 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Euphorbiaceae Jatropha Jatropha curcas
6694383 6694383 PRJNA1175041_P_NODE_103466_length_243_cov_0.894118_g100598_i0 PRJNA1175041 103466 243 0.894118 2.17270674 Capsicum annuum 4072 Plants Plants 361 3.2e-95   NTclustered gi|1059048066|gb|KU997025.1| 4072 g100598 i0 93.416 1 243 16 100 0 1 243 122978 123220 Capsicum annuum, 6 clones, complete sequence blastn 243 361 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
6694441 6694441 PRJNA1175041_P_NODE_106886_length_240_cov_0.910180_g104018_i0 PRJNA1175041 106886 240 0.91018 2.184432 Malus sylvestris 3752 Plants Plants 169 2.05e-37   NTclustered gi|2289485321|ref|XM_050262719.1| 3752 g104018 i0 84 13.325 175 28 73 0 66 240 140 314 PREDICTED: Malus sylvestris translationally-controlled tumor protein homolog (LOC126596206), mRNA blastn 3198 169 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Malus Malus sylvestris
7418932 7418932 PRJNA1175041_P_NODE_104386_length_242_cov_0.899408_g101518_i0 PRJNA1175041 104386 242 0.899408 2.17656736 Magnoliopsida 3398 Plants Plants 126 1.05e-32   NR KAK1439614.1 13708 g101518 i0 76.3 9.91735537190083 80 19 99.2 0 3 242 244 323 KAK1439614.1 hypothetical protein QVD17_05434 [Tagetes erecta] diamond 2400 127 0.992125984251969 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tagetes Tagetes erecta
7969724 7969724 PRJNA1175041_P_NODE_102587_length_244_cov_0.888889_g99719_i0 PRJNA1175041 102587 244 0.888889 2.16888916 Liquidambar formosana 63359 Plants Plants 79.7 5.06e-16   NR KAK9289475.1 63359 g99719 i0 62.5 0.983606557377049 80 21 98.4 3 243 4 68 138 KAK9289475.1 hypothetical protein L1049_007630 [Liquidambar formosana] diamond 240 79.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Saxifragales Altingiaceae Liquidambar Liquidambar formosana
7970869 7970869 PRJNA1175041_P_NODE_99907_length_246_cov_0.878613_g97039_i0 PRJNA1175041 99907 246 0.878613 2.16138798 Cannabis sativa 3483 Plants Plants 427 3.16e-115   NTclustered gi|2748541970|gb|CP158650.1| 3483 g97039 i0 97.967 3357.84552845528 246 5 100 0 1 246 41454400 41454645 Cannabis sativa cultivar ERBxHO40_23 chromosome 9 blastn 826030 427 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
11795017 11795017 PRJNA1175041_P_NODE_101910_length_244_cov_1.333333_g99042_i0 PRJNA1175041 101910 244 1.333333 3.25333252 Glycine max 3847 Plants Plants 52.8 0.022   NTclustered gi|2027504936|ref|XM_006595389.4| 3847 g99042 i0 100 0.114754098360656 28 0 11 0 195 222 363 336 PREDICTED: Glycine max QWRF motif-containing protein 3 (LOC102668093), mRNA blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
13071233 13071233 PRJNA1175041_P_NODE_99391_length_247_cov_0.867816_g96523_i0 PRJNA1175041 99391 247 0.867816 2.14350552 Bauhinia variegata 167791 Plants Plants 132 2.57e-34   NR KAI4333178.1 167791 g96523 i0 71.6 2.95141700404858 81 23 98.4 0 4 246 242 322 KAI4333178.1 hypothetical protein L6164_018016 [Bauhinia variegata] diamond 729 132 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Bauhinia Bauhinia variegata
13794449 13794449 PRJNA1175041_P_NODE_97791_length_248_cov_0.868571_g94923_i0 PRJNA1175041 97791 248 0.868571 2.15405608 Brassicaceae 3700 Plants Plants 392 1.1599999999999999e-104   NTclustered gi|2283399343|emb|OX261948.1| 3702 g94923 i0 100 88.9072580645161 212 0 85 0 19 230 86587 86376 Arabidopsis thaliana genome assembly, organelle: mitochondrion blastn 22049 392 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
14345461 14345461 PRJNA1175041_P_NODE_104972_length_242_cov_0.899408_g102104_i0 PRJNA1175041 104972 242 0.899408 2.17656736 Ziziphus jujuba 326968 Plants Plants 176 1.24e-39   NTclustered gi|2739574730|gb|CP157404.1| 326968 g102104 i0 81.057 7.59504132231405 227 37 93 6 2 225 879594 879817 Ziziphus jujuba isolate TW-2024b chromosome 02 blastn 1838 176 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rhamnaceae Ziziphus Ziziphus jujuba
14346581 14346581 PRJNA1175041_P_NODE_94152_length_255_cov_0.956044_g91284_i0 PRJNA1175041 94152 255 0.956044 2.4379122 Cucumis sativus 3659 Plants Plants 438 1.52e-118   NTclustered gi|212961083|gb|FJ410938.1| 3659 g91284 i0 97.647 6.01176470588235 255 6 100 0 1 255 79 333 Cucumis sativus satellite 2-C sequence blastn 1533 438 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis sativus
15620137 15620137 PRJNA1175041_P_NODE_82613_length_286_cov_1.399061_g79745_i0 PRJNA1175041 82613 286 1.399061 4.00131446 Cornus florida 4283 Plants Plants 187 6.9399999999999985e-43   NTclustered gi|2583665445|ref|XM_059795082.1| 4283 g79745 i0 79.323 4.11888111888112 266 55 93 0 18 283 248 513 PREDICTED: Cornus florida pathogenesis-related protein PR-4-like (LOC132298696), mRNA blastn 1178 187 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cornales Cornaceae Cornus Cornus florida
15620395 15620395 PRJNA1175041_P_NODE_98793_length_247_cov_0.873563_g95925_i0 PRJNA1175041 98793 247 0.873563 2.15770061 Ericales 41945 Plants Plants 139 1.21e-38   NR XP_028093611.1 4442 g95925 i0 87.8 12.9473684210526 82 10 99.6 0 247 2 176 257 XP_028093611.1 vesicle-associated protein 4-2-like [Camellia sinensis] diamond 3198 139 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Theaceae Camellia Camellia sinensis
16893510 16893510 PRJNA1175041_P_NODE_102294_length_244_cov_0.888889_g99426_i0 PRJNA1175041 102294 244 0.888889 2.16888916 Cannabis sativa 3483 Plants Plants 451 1.86e-122   NTclustered gi|2748540810|gb|CP158644.1| 3483 g99426 i0 100 8.46311475409836 244 0 100 0 1 244 8061607 8061850 Cannabis sativa cultivar ERBxHO40_23 chromosome 5 blastn 2065 451 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
20717846 20717846 PRJNA1175041_P_NODE_104977_length_242_cov_0.899408_g102109_i0 PRJNA1175041 104977 242 0.899408 2.17656736 Cryptomeria japonica 3369 Plants Plants 409 1.12e-109   NTclustered gi|2531692048|ref|XM_057986353.1| 3369 g102109 i0 97.107 16.9297520661157 242 7 100 0 1 242 331 572 PREDICTED: Cryptomeria japonica translationally-controlled tumor protein homolog (LOC131051728), mRNA blastn 4097 409 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
20717863 20717863 PRJNA1175041_P_NODE_106017_length_241_cov_0.904762_g103149_i0 PRJNA1175041 106017 241 0.904762 2.18047642 Cannabis sativa 3483 Plants Plants 440 3.959999999999999e-119   NTclustered gi|2748541248|gb|CP158646.1| 3483 g103149 i0 99.585 18278.9834024896 241 1 100 0 1 241 27344409 27344169 Cannabis sativa cultivar ERBxHO40_23 chromosome 3 blastn 4405235 440 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
21993846 21993846 PRJNA1175041_P_NODE_73778_length_314_cov_3.078838_g70910_i0 PRJNA1175041 73778 314 3.078838 9.66755132 Oryza sativa 4530 Plants Plants 52.8 0.029   NTclustered gi|2668294540|dbj|AP027395.1| 1771142 g70910 i0 100 0.089171974522293 28 0 9 0 94 121 10977675 10977702 Oryza sativa indica subgroup Inn Ma Yebaw DNA, chromosome: 11 blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
21994094 21994094 PRJNA1175041_P_NODE_87998_length_271_cov_1.424242_g85130_i0 PRJNA1175041 87998 271 1.424242 3.8596958200000002 Magnoliopsida 3398 Plants Plants 102 5.72e-26   NR XP_012858566.1 4155 g85130 i0 86 14.8339483394834 57 8 63.1 0 172 2 1 57 XP_012858566.1 PREDICTED: copper transport protein CCH-like [Erythranthe guttata] diamond 4020 103 0.990291262135922 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Phrymaceae Erythranthe Erythranthe guttata
22718007 22718007 PRJNA1175041_P_NODE_106818_length_240_cov_0.910180_g103950_i0 PRJNA1175041 106818 240 0.91018 2.184432 root 1 Root_unresolved Root_unresolved 438 1.4199999999999995e-118   NTclustered gi|929046211|gb|KR059940.1| 3483 g103950 i0 99.583 103.391666666667 240 1 100 0 1 240 381737 381976 Cannabis sativa cultivar Carmagnola mitochondrion, complete genome blastn 24814 438 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
23269550 23269550 PRJNA1175041_P_NODE_84159_length_282_cov_1.090909_g81291_i0 PRJNA1175041 84159 282 1.090909 3.07636338 Arabidopsis thaliana 3702 Plants Plants 510 3.57e-140   NTclustered gi|1063680909|ref|NM_100526.5| 3702 g81291 i0 99.291 29.6879432624113 282 2 100 0 1 282 1025 744 Arabidopsis thaliana alpha-crystallin domain 32.1 (ACD32.1), mRNA blastn 8372 510 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
24542428 24542428 PRJNA1175041_P_NODE_102720_length_244_cov_0.888889_g99852_i0 PRJNA1175041 102720 244 0.888889 2.16888916 Cucumis melo 3656 Plants Plants 451 1.86e-122   NTclustered gi|2316573702|ref|XM_008464309.2| 3656 g99852 i0 100 20.2418032786885 244 0 100 0 1 244 2191 2434 PREDICTED: Cucumis melo enolase (LOC103500869), mRNA blastn 4939 451 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
24542471 24542471 PRJNA1175041_P_NODE_105800_length_241_cov_0.904762_g102932_i0 PRJNA1175041 105800 241 0.904762 2.18047642 Trifolium pratense 57577 Plants Plants 309 1.17e-79   NTclustered gi|2179010207|ref|XM_045965285.1| 57577 g102932 i0 89.958 31.8215767634855 239 24 99 0 3 241 537 775 PREDICTED: Trifolium pratense serine hydroxymethyltransferase 4-like (LOC123914215), mRNA blastn 7669 309 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Trifolium Trifolium pratense
28209028 28209028 PRJNA1175041_P_NODE_58966_length_381_cov_0.896104_g56098_i0 PRJNA1175041 58966 381 0.896104 3.41415624 Vitis vinifera 29760 Plants Plants 55.5 7.43e-7   NR CBI20901.3 29760 g56098 i0 59.6 0.818897637795276 52 20 40.9 1 368 213 3 53 CBI20901.3 unnamed protein product, partial [Vitis vinifera] diamond 312 55.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Vitales Vitaceae Vitis Vitis vinifera
28259726 28259726 PRJNA1175041_P_NODE_85746_length_277_cov_1.627451_g82878_i0 PRJNA1175041 85746 277 1.627451 4.50803927 Magnoliopsida 3398 Plants Plants 136 1.5e-37   NR XP_030508234.1 3483 g82878 i0 72.8 1.9927797833935 92 25 99.6 0 276 1 142 233 XP_030508234.1 uncharacterized protein LOC115722982 [Cannabis sativa] diamond 552 136 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
28386185 28386185 PRJNA1175041_P_NODE_99046_length_247_cov_0.873563_g96178_i0 PRJNA1175041 99046 247 0.873563 2.15770061 Magnoliopsida 3398 Plants Plants 101 9.57e-26   NR XP_009804089.1 4096 g96178 i0 71.7 3.34008097165992 60 17 72.9 0 180 1 1 60 XP_009804089.1 uncharacterized protein [Nicotiana sylvestris] diamond 825 101 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana sylvestris
28682985 28682985 PRJNA1175041_P_NODE_107207_length_240_cov_0.898204_g104339_i0 PRJNA1175041 107207 240 0.898204 2.1556896 Zea mays 4577 Plants Plants 116 1.72e-30   NR NP_001168103.1 4577 g104339 i0 76.1 9.95 67 16 83.8 0 240 40 116 182 NP_001168103.1 uncharacterized protein LOC100381841 [Zea mays] diamond 2388 116 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
28859702 28859702 PRJNA1175041_P_NODE_50848_length_434_cov_0.847645_g47981_i0 PRJNA1175041 50848 434 0.847645 3.6787793 Magnoliopsida 3398 Plants Plants 119 8.480000000000001e-29   NR CAL9014535.1 151428 g47981 i0 47.4 6.33870967741935 133 62 87.1 3 390 13 3 134 CAL9014535.1 unnamed protein product [Prunus brigantina] diamond 2751 119 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Prunus Prunus brigantina
31734703 31734703 PRJNA1175041_P_NODE_106877_length_240_cov_0.910180_g104009_i0 PRJNA1175041 106877 240 0.91018 2.184432 Magnoliopsida 3398 Plants Plants 126 1.51e-31   NR RVX07820.1 29760 g104009 i0 80.2 13.1375 81 15 100 1 240 1 303 383 RVX07820.1 TBC1 domain family member 5 [Vitis vinifera] diamond 3153 126 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Vitales Vitaceae Vitis Vitis vinifera
32367848 32367848 PRJNA1175041_P_NODE_67739_length_337_cov_2.761364_g64871_i0 PRJNA1175041 67739 337 2.761364 9.30579668 Magnoliopsida 3398 Plants Plants 45.8 0.00138   NR KAJ9672252.1 103349 g64871 i0 56.3 1.28189910979228 48 21 42.7 0 12 155 1 48 KAJ9672252.1 hypothetical protein PVL29_025747 [Vitis rotundifolia] diamond 432 46.2 0.991341991341991 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Vitales Vitaceae Vitis Vitis rotundifolia
32443693 32443693 PRJNA1175041_P_NODE_80459_length_292_cov_2.178082_g77591_i0 PRJNA1175041 80459 292 2.178082 6.35999944 Paulownia fortunei 586722 Plants Plants 86.3 1.71e-17   NR KAI3468241.1 586722 g77591 i0 50 1.72602739726027 84 41 86.3 1 39 290 135 217 KAI3468241.1 hypothetical protein Pfo_024904 [Paulownia fortunei] diamond 504 86.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Paulowniaceae Paulownia Paulownia fortunei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;