RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1174770", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 1 ✖

tax_phylum 1

  • Pisuviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1174770 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21992910 21992910 PRJNA1174770_P_NODE_7478_length_173_cov_0.838710_g7389_i0 PRJNA1174770 7478 173 0.83871 1.4509683 Varroa picorna-like virus 2873563 Viruses Viruses 259 7.98e-65   NTclustered gi|2111829811|gb|MZ822077.1| 2873563 g7389 i0 93.642 1.98843930635838 173 11 100 0 1 173 7501 7673 MAG: Varroa picorna-like virus isolate No11-Mi016-HLJ2018, complete genome blastn 344 259 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Varroa picorna-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;