RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1174770" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA1174770 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14345238 14345238 PRJNA1174770_P_NODE_10652_length_164_cov_0.904348_g10563_i0 PRJNA1174770 10652 164 0.904348 1.48313072 Tobamovirus tropici 3432893 Viruses Viruses 303 3.42e-78   NTclustered gi|1893169051|gb|MT130385.1| 327387 g10563 i0 100 12.0060975609756 164 0 100 0 1 164 3669 3832 Tropical soda apple mosaic virus isolate I4-11-TSAMV 183 kDa replicase, movement protein, and coat protein genes, complete cds blastn 1969 303 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tropici
21992910 21992910 PRJNA1174770_P_NODE_7478_length_173_cov_0.838710_g7389_i0 PRJNA1174770 7478 173 0.83871 1.4509683 Varroa picorna-like virus 2873563 Viruses Viruses 259 7.98e-65   NTclustered gi|2111829811|gb|MZ822077.1| 2873563 g7389 i0 93.642 1.98843930635838 173 11 100 0 1 173 7501 7673 MAG: Varroa picorna-like virus isolate No11-Mi016-HLJ2018, complete genome blastn 344 259 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Varroa picorna-like virus
29125152 29125152 PRJNA1174770_P_NODE_6549_length_183_cov_1.895522_g6460_i0 PRJNA1174770 6549 183 1.895522 3.46880526 Salarius guttatus piscichuvirus 2951531 Viruses Viruses 45.1 0.00257   NR YP_010797600.1 2951531 g6460 i0 31.7 0.983606557377049 60 41 98.4 0 181 2 71 130 YP_010797600.1 L protein [Guangdong red-banded snake chuvirus-like virus] diamond 180 45.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Salarius guttatus piscichuvirus
31367995 31367995 PRJNA1174770_P_NODE_576_length_670_cov_2.763285_g501_i0 PRJNA1174770 576 670 2.763285 18.5140095 African cichlid piscichuvirus 3065075 Viruses Viruses 126 3.24e-29   NR WLN26256.1 3065075 g501 i0 44.1 0.649253731343284 145 81 64.9 0 7 441 90 234 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 435 126 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;