RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1174770", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1174770 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27786486 27786486 PRJNA1174770_P_NODE_11924_length_162_cov_0.920354_g11835_i0 PRJNA1174770 11924 162 0.920354 1.49097348 Bacteria 2 Bacteria Bacteria 101 5.3399999999999996e-24   NR PYN61734.1 2053607 g11835 i0 81.5 5 54 10 100 0 162 1 255 308 PYN61734.1 MAG: malate/lactate/ureidoglycolate dehydrogenase [Candidatus Rokuibacteriota bacterium] diamond 810 101 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30407650 30407650 PRJNA1174770_P_NODE_9993_length_165_cov_0.896552_g9904_i0 PRJNA1174770 9993 165 0.896552 1.4793108 Bacteria 2 Bacteria Bacteria 104 7.63e-26   NR PYN62308.1 2053607 g9904 i0 96.3 3.92727272727273 54 2 98.2 0 3 164 8 61 PYN62308.1 MAG: MBL fold metallo-hydrolase [Candidatus Rokuibacteriota bacterium] diamond 648 105 0.990476190476191 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;