RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1174234" and tax_phylum = "Thermoproteota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1174234 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10519809 10519809 PRJNA1174234_P_NODE_35829_length_241_cov_0.916667_g35633_i0 PRJNA1174234 35829 241 0.916667 2.20916747 uncultured crenarchaeote 29281 Archaea Archaea 195 3.41e-45   NTclustered gi|82618470|gb|DQ278118.1| 29281 g35633 i0 98.198 3.48132780082988 111 2 46 0 1 111 1383 1493 Uncultured crenarchaeote clone OdenA-100ii 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence blastn 839 195 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
11244212 11244212 PRJNA1174234_P_NODE_21909_length_295_cov_1.153153_g21713_i0 PRJNA1174234 21909 295 1.153153 3.40180135 Thermoprotei archaeon 2250277 Archaea Archaea 60.5 1.19e-8   NR RLF13116.1 2250277 g21713 i0 36.1 1.56610169491525 72 45 72.2 1 215 3 27 98 RLF13116.1 MAG: inosine-5-monophosphate dehydrogenase [Thermoprotei archaeon] diamond 462 60.5 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon
25267222 25267222 PRJNA1174234_P_NODE_5940_length_557_cov_15.590909_g5744_i0 PRJNA1174234 5940 557 15.590909 86.84136313 Thermoproteati 1783275 Archaea Archaea 1027 0   NTclustered gi|82618470|gb|DQ278118.1| 29281 g5744 i0 100 98.1723518850987 556 0 99 0 1 556 817 1372 Uncultured crenarchaeote clone OdenA-100ii 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence blastn 54682 1027 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;