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contig_metadata

6 rows where bioproject = "PRJNA1174234", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 6 ✖

tax_phylum 1

  • Nitrososphaerota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1174234 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4143028 4143028 PRJNA1174234_P_NODE_244_length_1738_cov_11.393994_g214_i0 PRJNA1174234 244 1738 11.393994 198.02761572 Nitrosarchaeum sp. 2026886 Archaea Archaea 831 3.35e-297   NR MFB5612793.1 2026886 g214 i0 88.8 0.83199079401611 482 54 83.2 0 1 1446 135 616 MFB5612793.1 molecular chaperone DnaK [Nitrosarchaeum sp.] diamond 1446 831 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
15618839 15618839 PRJNA1174234_P_NODE_20993_length_301_cov_1.776316_g20797_i0 PRJNA1174234 20993 301 1.776316 5.34671116 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 540 4.899999999999999e-149   NTclustered gi|937513727|gb|CP012850.1| 1353260 g20797 i0 99.003 7.86046511627907 301 3 100 0 1 301 3035484 3035784 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 2366 540 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
21992804 21992804 PRJNA1174234_P_NODE_38_length_2982_cov_15.037126_g34_i0 PRJNA1174234 38 2982 15.037126 448.40709732 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 5443 0   NTclustered gi|937513727|gb|CP012850.1| 1353260 g34 i0 99.631 94.3675385647217 2982 7 99 2 1 2978 850678 847697 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 281404 5443 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
26660372 26660372 PRJNA1174234_P_NODE_30081_length_250_cov_0.870056_g29885_i0 PRJNA1174234 30081 250 0.870056 2.17514 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 45.8 0.00163   NR MFB5600042.1 2169593 g29885 i0 47.5 4.416 40 21 48 0 124 5 91 130 MFB5600042.1 universal stress protein [Nitrososphaeraceae archaeon] diamond 1104 45.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31399576 31399576 PRJNA1174234_P_NODE_5116_length_596_cov_1.701721_g4921_i0 PRJNA1174234 5116 596 1.701721 10.14225716 Candidatus Geocrenenecus arthurdayi 2978060 Archaea Archaea 70.5 8.04e-11   NR MCL7388697.1 2978060 g4921 i0 38.8 0.518456375838926 103 59 51.8 3 375 67 25 123 MCL7388697.1 hypothetical protein [Candidatus Geocrenenecus arthurdayi] diamond 309 70.5 1 Archaea   Thermoproteati Nitrososphaerota     Candidatus Wolframiiraptoraceae Candidatus Geocrenenecus Candidatus Geocrenenecus arthurdayi
32221902 32221902 PRJNA1174234_P_NODE_22818_length_289_cov_0.921296_g22622_i0 PRJNA1174234 22818 289 0.921296 2.66254544 Nitrososphaera sp. 1971748 Archaea Archaea 99.4 6.0700000000000005e-22   NR HVD21270.1 1971748 g22622 i0 93.8 1.51557093425606 48 3 49.8 0 143 286 172 219 HVD21270.1 retrotransposon gag family protein [Nitrososphaera sp.] diamond 438 99.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;