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contig_metadata

24 rows where bioproject = "PRJNA1174234", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 24 ✖

tax_phylum 1

  • Acidobacteriota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1174234 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
316117 316117 PRJNA1174234_P_NODE_13021_length_381_cov_3.250000_g12825_i0 PRJNA1174234 13021 381 3.25 12.3825 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 483 1.09e-131   NTclustered gi|76574288|gb|DQ139436.1| 171953 g12825 i0 91.061 93.2834645669291 358 30 94 2 25 381 372 16 Uncultured Acidobacteria bacterium clone CAL6 23S ribosomal RNA gene, partial sequence blastn 35541 483 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
2866885 2866885 PRJNA1174234_P_NODE_14583_length_361_cov_0.989583_g14387_i0 PRJNA1174234 14583 361 0.989583 3.57239463 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 130 6.15e-33   NR HTB18087.1 2212468 g14387 i0 68.2 2.19390581717452 88 28 73.1 0 360 97 405 492 HTB18087.1 aldehyde dehydrogenase family protein [Bryobacteraceae bacterium] diamond 792 130 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
4143129 4143129 PRJNA1174234_P_NODE_7924_length_488_cov_1.660241_g7728_i0 PRJNA1174234 7924 488 1.660241 8.10197608 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 73.1 3.65e-8   NTclustered gi|2874254091|emb|OY970174.1| 171953 g7728 i0 84.416 0.305327868852459 77 8 15 2 246 320 2496911 2496985 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 149 73.1 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
7969300 7969300 PRJNA1174234_P_NODE_10567_length_424_cov_1.509972_g10371_i0 PRJNA1174234 10567 424 1.509972 6.40228128 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 187 1.07e-42   NTclustered gi|2893358426|emb|OZ220718.1| 2910147 g10371 i0 80.077 1.76415094339623 261 44 61 8 1 257 1182568 1182312 MAG: Vicinamibacterales bacterium isolate 0ce2d42f-2bf0-44bc-a671-070680eb922c genome assembly, chromosome: 1 blastn 748 187 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
11794657 11794657 PRJNA1174234_P_NODE_15030_length_355_cov_2.641844_g14834_i0 PRJNA1174234 15030 355 2.641844 9.3785462 Edaphobacter paludis 3035702 Bacteria Bacteria 73.1 2.58e-8   NTclustered gi|2737763816|gb|CP121194.1| 3035702 g14834 i0 95.556 10.2422535211268 45 2 13 0 311 355 2761378 2761422 Edaphobacter paludis strain DSM 109919 chromosome, complete genome blastn 3636 73.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter paludis
23268354 23268354 PRJNA1174234_P_NODE_31519_length_247_cov_0.885057_g31323_i0 PRJNA1174234 31519 247 0.885057 2.18609079 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 294 3.36e-75   NTclustered gi|2874253677|emb|OY969111.1| 171953 g31323 i0 88.211 1.97570850202429 246 29 99 0 2 247 1014396 1014641 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 blastn 488 294 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26838424 26838424 PRJNA1174234_P_NODE_11801_length_401_cov_1.408537_g11605_i0 PRJNA1174234 11801 401 1.408537 5.64823337 Terracidiphilus 1768185 Bacteria Bacteria 184 4.0699999999999986e-55   NR HUH63403.1 1964191 g11605 i0 68.2 19.7506234413965 132 42 98.8 0 401 6 128 259 HUH63403.1 aldolase/citrate lyase family protein [Terracidiphilus sp.] diamond 7920 184 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
26964734 26964734 PRJNA1174234_P_NODE_27782_length_258_cov_1.248649_g27586_i0 PRJNA1174234 27782 258 1.248649 3.22151442 Terriglobia 204432 Bacteria Bacteria 85.1 9.79e-19   NR HUA92617.1 1964191 g27586 i0 47.1 2.96511627906977 85 44 98.8 1 3 257 5 88 HUA92617.1 GyrI-like domain-containing protein [Terracidiphilus sp.] diamond 765 85.5 0.9953216374269 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
27028107 27028107 PRJNA1174234_P_NODE_35942_length_241_cov_0.904762_g35746_i0 PRJNA1174234 35942 241 0.904762 2.18047642 Terriglobia 204432 Bacteria Bacteria 63.2 2.26e-9   NR MCU1234982.1 2068625 g35746 i0 68 2.55186721991701 50 15 61 1 235 89 21 70 MCU1234982.1 Kelch repeat-containing protein [Candidatus Solibacter sp.] diamond 615 63.5 0.995275590551181 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Solibacter Candidatus Solibacter sp.
27230121 27230121 PRJNA1174234_P_NODE_16303_length_342_cov_1.144981_g16107_i0 PRJNA1174234 16303 342 1.144981 3.91583502 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 47.4 0.00258   NR HEX5214908.1 2910147 g16107 i0 32 1.07017543859649 122 61 90.4 5 339 31 110 228 HEX5214908.1 PQQ-binding-like beta-propeller repeat protein [Vicinamibacterales bacterium] diamond 366 47.4 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
27420028 27420028 PRJNA1174234_P_NODE_13703_length_372_cov_1.020067_g13507_i0 PRJNA1174234 13703 372 1.020067 3.79464924 Geothrix sp. 1962974 Bacteria Bacteria 67.8 5.8e-11   NR MCM2249838.1 1962974 g13507 i0 33.9 1.95161290322581 121 73 97.6 2 370 8 83 196 MCM2249838.1 CAP domain-containing protein [Geothrix sp.] diamond 726 67.8 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp.
27925011 27925011 PRJNA1174234_P_NODE_34345_length_243_cov_0.905882_g34149_i0 PRJNA1174234 34345 243 0.905882 2.20129326 Acidobacteriota bacterium 1978231 Bacteria Bacteria 46.2 0.0022   NR MBU1339793.1 1978231 g34149 i0 32.9 0.975308641975309 79 51 97.5 1 242 6 151 227 MBU1339793.1 PAS domain-containing protein [Acidobacteriota bacterium] diamond 237 46.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27956639 27956639 PRJNA1174234_P_NODE_29385_length_251_cov_0.865169_g29189_i0 PRJNA1174234 29385 251 0.865169 2.17157419 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.0397   NR PYQ54871.1 1978231 g29189 i0 37.5 0.764940239043825 64 38 74.1 1 251 66 113 176 PYQ54871.1 MAG: hypothetical protein DMF53_28875, partial [Acidobacteriota bacterium] diamond 192 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28366895 28366895 PRJNA1174234_P_NODE_24886_length_276_cov_1.004926_g24690_i0 PRJNA1174234 24886 276 1.004926 2.77359576 Acidobacteriota bacterium 1978231 Bacteria Bacteria 53.5 9.02e-6   NR MEJ2143646.1 1978231 g24690 i0 45.5 0.717391304347826 66 36 71.7 0 1 198 546 611 MEJ2143646.1 adenylate/guanylate cyclase domain-containing protein [Acidobacteriota bacterium] diamond 198 53.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28859698 28859698 PRJNA1174234_P_NODE_17048_length_334_cov_1.306513_g16852_i0 PRJNA1174234 17048 334 1.306513 4.36375342 Pseudomonadati 3379134 Bacteria Bacteria 158 2.06e-45   NR HUH63403.1 1964191 g16852 i0 71.3 9.70059880239521 108 31 97 0 9 332 127 234 HUH63403.1 aldolase/citrate lyase family protein [Terracidiphilus sp.] diamond 3240 158 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
29775335 29775335 PRJNA1174234_P_NODE_30631_length_249_cov_0.875000_g30435_i0 PRJNA1174234 30631 249 0.875 2.17875 Bryobacterales 332160 Bacteria Bacteria 72.4 1.51e-12   NR SPF32762.1 2043165 g30435 i0 56.4 2 55 24 66.3 0 174 10 739 793 SPF32762.1 exported hypothetical protein [Candidatus Sulfopaludibacter sp. SbA4] diamond 498 72.8 0.994505494505495 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Sulfopaludibacter Candidatus Sulfopaludibacter sp. SbA4
29882842 29882842 PRJNA1174234_P_NODE_6131_length_550_cov_1.551363_g5935_i0 PRJNA1174234 6131 550 1.551363 8.5324965 Acidobacteriota bacterium 1978231 Bacteria Bacteria 116 1.08e-27   NR MBV9217657.1 1978231 g5935 i0 39.3 1.81636363636364 163 93 87.8 4 14 496 156 314 MBV9217657.1 S1/P1 nuclease [Acidobacteriota bacterium] diamond 999 116 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30704036 30704036 PRJNA1174234_P_NODE_5334_length_585_cov_5.728516_g5139_i0 PRJNA1174234 5334 585 5.728516 33.5118186 Acidobacteriota bacterium 1978231 Bacteria Bacteria 137 6.1e-38   NR MDQ7008653.1 1978231 g5139 i0 74.8 0.528205128205128 103 26 52.8 0 88 396 8 110 MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] diamond 309 137 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31020114 31020114 PRJNA1174234_P_NODE_28935_length_251_cov_1.511236_g28739_i0 PRJNA1174234 28935 251 1.511236 3.79320236 Acidobacteriota bacterium 1978231 Bacteria Bacteria 55.5 1.09e-6   NR MFM8394239.1 1978231 g28739 i0 48.2 0.669322709163347 56 28 65.7 1 84 248 214 269 MFM8394239.1 hypothetical protein [Acidobacteriota bacterium] diamond 168 55.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31462865 31462865 PRJNA1174234_P_NODE_31976_length_246_cov_2.664740_g31780_i0 PRJNA1174234 31976 246 2.66474 6.5552604 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 53.5 4.61e-6   NR HLM61293.1 2283092 g31780 i0 45.2 0.75609756097561 62 25 64.6 1 88 246 5 66 HLM61293.1 TspO/MBR family protein [Pyrinomonadaceae bacterium] diamond 186 53.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31557771 31557771 PRJNA1174234_P_NODE_35196_length_242_cov_0.911243_g35000_i0 PRJNA1174234 35196 242 0.911243 2.20520806 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 133 4.43e-34   NR HEY9467050.1 2910147 g35000 i0 71.3 0.991735537190083 80 23 99.2 0 3 242 471 550 HEY9467050.1 right-handed parallel beta-helix repeat-containing protein [Vicinamibacterales bacterium] diamond 240 133 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31683899 31683899 PRJNA1174234_P_NODE_9837_length_439_cov_2.715847_g9641_i0 PRJNA1174234 9837 439 2.715847 11.92256833 Acidobacteriota bacterium 1978231 Bacteria Bacteria 132 6.9599999999999994e-37   NR MDQ7008653.1 1978231 g9641 i0 76.8 0.649202733485194 95 22 64.9 0 90 374 17 111 MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] diamond 285 132 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32632672 32632672 PRJNA1174234_P_NODE_640_length_1332_cov_2.432883_g564_i0 PRJNA1174234 640 1332 2.432883 32.40600156 Acidobacteriota bacterium 1978231 Bacteria Bacteria 53.9 7.79e-4   NR MBS1873370.1 1978231 g564 i0 35.2 0.752252252252252 108 51 24.3 4 1008 1331 112 200 MBS1873370.1 hypothetical protein [Acidobacteriota bacterium] diamond 1002 53.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32651716 32651716 PRJNA1174234_P_NODE_20140_length_308_cov_0.978723_g19944_i0 PRJNA1174234 20140 308 0.978723 3.01446684 Bacteria 2 Bacteria Bacteria 120 1.51e-31   NR MBK7709494.1 1978231 g19944 i0 56.9 26.6298701298701 102 44 99.4 0 2 307 47 148 MBK7709494.1 uridine kinase [Acidobacteriota bacterium] diamond 8202 121 0.991735537190083 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;