contig_metadata
12 rows where bioproject = "PRJNA1174234", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4868971 | 4868971 | PRJNA1174234_P_NODE_10504_length_425_cov_2.375000_g10308_i0 | PRJNA1174234 | 10504 | 425 | 2.375 | 10.09375 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 115 | 1.98e-29 | NR | HNO24933.1 | 2026757 | g10308 | i0 | 72.3 | 1.42588235294118 | 83 | 23 | 58.6 | 0 | 424 | 176 | 65 | 147 | HNO24933.1 Hsp70 family protein [Leptospiraceae bacterium] | diamond | 606 | 115 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 23268239 | 23268239 | PRJNA1174234_P_NODE_11759_length_402_cov_1.158055_g11563_i0 | PRJNA1174234 | 11759 | 402 | 1.158055 | 4.6553811 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 210 | 2.97e-67 | NR | MCC5815248.1 | 178 | g11563 | i0 | 73.1 | 25.9477611940299 | 134 | 35 | 100 | 1 | 1 | 402 | 13 | 145 | MCC5815248.1 glycine dehydrogenase (aminomethyl-transferring) [Leptospira sp.] | diamond | 10431 | 210 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. | ||
| 26787446 | 26787446 | PRJNA1174234_P_NODE_11781_length_401_cov_1.945122_g11585_i0 | PRJNA1174234 | 11781 | 401 | 1.945122 | 7.79993922 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 68.2 | 2.25e-12 | NR | MCB1177358.1 | 2026757 | g11585 | i0 | 49.1 | 0.42643391521197 | 57 | 27 | 42.6 | 1 | 201 | 371 | 2 | 56 | MCB1177358.1 hypothetical protein [Leptospiraceae bacterium] | diamond | 171 | 68.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 27103605 | 27103605 | PRJNA1174234_P_NODE_12142_length_395_cov_1.847826_g11946_i0 | PRJNA1174234 | 12142 | 395 | 1.847826 | 7.2989127 | Leptospirales bacterium | 2604146 | Bacteria | Bacteria | 42 | 0.0268 | NR | MCL1911952.1 | 2604146 | g11946 | i0 | 61.5 | 0.19746835443038 | 26 | 10 | 19.7 | 0 | 394 | 317 | 25 | 50 | MCL1911952.1 hypothetical protein [Leptospirales bacterium] | diamond | 78 | 42 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospirales bacterium | ||||
| 27230117 | 27230117 | PRJNA1174234_P_NODE_14923_length_357_cov_1.084507_g14727_i0 | PRJNA1174234 | 14923 | 357 | 1.084507 | 3.87168999 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 57.8 | 1.72e-8 | NR | MCB1177358.1 | 2026757 | g14727 | i0 | 50 | 0.420168067226891 | 50 | 23 | 42 | 1 | 153 | 4 | 2 | 49 | MCB1177358.1 hypothetical protein [Leptospiraceae bacterium] | diamond | 150 | 57.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 28366893 | 28366893 | PRJNA1174234_P_NODE_24346_length_279_cov_1.121359_g24150_i0 | PRJNA1174234 | 24346 | 279 | 1.121359 | 3.12859161 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 92 | 1.82e-20 | NR | MBN2874962.1 | 2026792 | g24150 | i0 | 50 | 1.97849462365591 | 92 | 46 | 98.9 | 0 | 279 | 4 | 104 | 195 | MBN2874962.1 CAP domain-containing protein [Spirochaetales bacterium] | diamond | 552 | 92 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 28935445 | 28935445 | PRJNA1174234_P_NODE_25448_length_272_cov_1.477387_g25252_i0 | PRJNA1174234 | 25448 | 272 | 1.477387 | 4.01849264 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 43.1 | 0.0334 | NR | MCK9190766.1 | 2791017 | g25252 | i0 | 39.6 | 1.05882352941176 | 48 | 29 | 52.9 | 0 | 147 | 4 | 38 | 85 | MCK9190766.1 SIMPL domain-containing protein [Sphaerochaetaceae bacterium] | diamond | 288 | 43.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 28967094 | 28967094 | PRJNA1174234_P_NODE_3308_length_724_cov_1.075269_g3130_i0 | PRJNA1174234 | 3308 | 724 | 1.075269 | 7.78494756 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 222 | 8.24e-68 | NR | MEM7179955.1 | 2202144 | g3130 | i0 | 55.7 | 4.16022099447514 | 201 | 86 | 82 | 1 | 3 | 596 | 133 | 333 | MEM7179955.1 SDR family NAD(P)-dependent oxidoreductase [Spirochaetota bacterium] | diamond | 3012 | 222 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 29125110 | 29125110 | PRJNA1174234_P_NODE_26089_length_268_cov_1.620513_g25893_i0 | PRJNA1174234 | 26089 | 268 | 1.620513 | 4.34297484 | Leptospira wolbachii | 29511 | Bacteria | Bacteria | 49.7 | 1.71e-4 | NR | WP_015680362.1 | 29511 | g25893 | i0 | 45.5 | 0.985074626865672 | 44 | 24 | 49.3 | 0 | 260 | 129 | 382 | 425 | WP_015680362.1 ankyrin repeat domain-containing protein [Leptospira wolbachii] | diamond | 264 | 49.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira wolbachii | ||
| 29914399 | 29914399 | PRJNA1174234_P_NODE_34211_length_243_cov_0.905882_g34015_i0 | PRJNA1174234 | 34211 | 243 | 0.905882 | 2.20129326 | Leptospira semungkisensis | 2484985 | Bacteria | Bacteria | 43.1 | 0.0197 | NR | TGK01118.1 | 2484985 | g34015 | i0 | 53.7 | 0.506172839506173 | 41 | 15 | 50.6 | 1 | 189 | 67 | 5 | 41 | TGK01118.1 hypothetical protein EHO59_12910 [Leptospira semungkisensis] | diamond | 123 | 43.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira semungkisensis | ||
| 30072086 | 30072086 | PRJNA1174234_P_NODE_732_length_1274_cov_1.802664_g649_i0 | PRJNA1174234 | 732 | 1274 | 1.802664 | 22.96593936 | Treponema sp. | 166 | Bacteria | Bacteria | 67.8 | 1.07e-8 | NR | MEE0352004.1 | 166 | g649 | i0 | 38 | 0.744113029827316 | 158 | 88 | 37.2 | 7 | 730 | 257 | 91 | 238 | MEE0352004.1 CAP domain-containing protein [Treponema sp.] | diamond | 948 | 67.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 32884656 | 32884656 | PRJNA1174234_P_NODE_26100_length_268_cov_1.579487_g25904_i0 | PRJNA1174234 | 26100 | 268 | 1.579487 | 4.23302516 | Treponemataceae bacterium | 2854022 | Bacteria | Bacteria | 44.3 | 0.0102 | NR | MCQ2593847.1 | 2854022 | g25904 | i0 | 60 | 1.14179104477612 | 30 | 12 | 33.6 | 0 | 91 | 2 | 51 | 80 | MCQ2593847.1 HD domain-containing protein [Treponemataceae bacterium] | diamond | 306 | 44.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponemataceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;