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contig_metadata

9 rows where bioproject = "PRJNA1174234" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1174234 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7969438 7969438 PRJNA1174234_P_NODE_3407_length_714_cov_2.148206_g3228_i0 PRJNA1174234 3407 714 2.148206 15.33819084 Thermoplasmata archaeon 1906666 Archaea Archaea 62.1 1.19e-4   NTclustered gi|2108430933|gb|CP070629.1| 1906666 g3228 i0 97.222 4.54901960784314 36 1 5 0 81 116 816497 816462 MAG: Thermoplasmata archaeon isolate bin983 chromosome blastn 3248 62.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27861727 27861727 PRJNA1174234_P_NODE_31065_length_248_cov_0.880000_g30869_i0 PRJNA1174234 31065 248 0.88 2.1824 Methanomicrobiales archaeon 2184052 Archaea Archaea 50.1 9.84e-5   NR MEI6842808.1 2184052 g30869 i0 42.9 1.51209677419355 56 30 65.3 1 245 84 78 133 MEI6842808.1 protein kinase [Methanomicrobiales archaeon] diamond 375 50.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
27912391 27912391 PRJNA1174234_P_NODE_17205_length_333_cov_0.888462_g17009_i0 PRJNA1174234 17205 333 0.888462 2.95857846 root 1 Root_unresolved Root_unresolved 45.1 0.0162   NR RLG73092.1 2026739 g17009 i0 34.1 1.58558558558559 91 51 73.9 1 79 324 478 568 RLG73092.1 MAG: hypothetical protein DRO11_00595 [Methanobacteriota archaeon] diamond 528 45.1 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28619824 28619824 PRJNA1174234_P_NODE_34267_length_243_cov_0.905882_g34071_i0 PRJNA1174234 34267 243 0.905882 2.20129326 Methanobacteriota archaeon 2026739 Archaea Archaea 83.2 1.67e-16   NR MBJ16883.1 2026739 g34071 i0 60.9 2.37037037037037 64 25 79 0 196 5 117 180 MBJ16883.1 histidine--tRNA ligase [Methanobacteriota archaeon] diamond 576 83.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28670483 28670483 PRJNA1174234_P_NODE_21027_length_301_cov_1.350877_g20831_i0 PRJNA1174234 21027 301 1.350877 4.06613977 root 1 Root_unresolved Root_unresolved 63.2 4.86e-9   NR HJH57925.1 2026739 g20831 i0 36.4 4.07641196013289 99 59 94.7 1 301 17 372 470 HJH57925.1 5'-nucleotidase C-terminal domain-containing protein [Methanobacteriota archaeon] diamond 1227 63.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31291930 31291930 PRJNA1174234_P_NODE_11215_length_412_cov_2.427729_g11019_i0 PRJNA1174234 11215 412 2.427729 10.00224348 root 1 Root_unresolved Root_unresolved 198 1.03e-58   NR MDA7464093.1 1915863 g11019 i0 63.8 2.78155339805825 130 45 94.7 1 20 409 309 436 MDA7464093.1 DNA photolyase family protein [Candidatus Poseidonia alphae] diamond 1146 198 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae Candidatus Poseidonia Candidatus Poseidonia alphae
31355406 31355406 PRJNA1174234_P_NODE_32116_length_246_cov_1.208092_g31920_i0 PRJNA1174234 32116 246 1.208092 2.97190632 Methanobacteriati 3366610 Archaea Archaea 44.7 0.00404   NR RZD50530.1 2026739 g31920 i0 47.5 1.54878048780488 40 21 48.8 0 121 2 115 154 RZD50530.1 MAG: hypothetical protein CXT66_02840 [Methanobacteriota archaeon] diamond 381 44.7 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31589335 31589335 PRJNA1174234_P_NODE_24376_length_279_cov_1.106796_g24180_i0 PRJNA1174234 24376 279 1.106796 3.08796084 Methanotrichaceae archaeon 2595067 Archaea Archaea 43.1 0.0386   NR MDD1753682.1 2595067 g24180 i0 41.3 0.67741935483871 63 30 67.7 2 59 247 120 175 MDD1753682.1 thermosome subunit [Methanotrichaceae archaeon] diamond 189 43.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae   Methanotrichaceae archaeon
32790106 32790106 PRJNA1174234_P_NODE_31160_length_248_cov_0.880000_g30964_i0 PRJNA1174234 31160 248 0.88 2.1824 Methanoregulaceae archaeon 2485498 Archaea Archaea 57.8 1.99e-7   NR HNJ81026.1 2485498 g30964 i0 41.7 0.725806451612903 60 33 72.6 1 203 24 603 660 HNJ81026.1 Ig-like domain-containing protein [Methanoregulaceae archaeon] diamond 180 57.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;