RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1174234", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1174234 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29945867 29945867 PRJNA1174234_P_NODE_13911_length_369_cov_1.472973_g13715_i0 PRJNA1174234 13911 369 1.472973 5.43527037 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 94.4 5.84e-20   NR ETO33147.1 46433 g13715 i0 44.2 1.69105691056911 104 57 84.6 1 42 353 200 302 ETO33147.1 hypothetical protein RFI_03961 [Reticulomyxa filosa] diamond 624 94.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30451518 30451518 PRJNA1174234_P_NODE_12873_length_384_cov_0.942122_g12677_i0 PRJNA1174234 12873 384 0.942122 3.61774848 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.0123   NR ETO05166.1 46433 g12677 i0 46.5 0.3359375 43 21 33.6 1 85 213 253 293 ETO05166.1 hypothetical protein RFI_32230, partial [Reticulomyxa filosa] diamond 129 45.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;