RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1174234", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA1174234 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28146221 28146221 PRJNA1174234_P_NODE_2645_length_792_cov_1.668985_g2476_i0 PRJNA1174234 2645 792 1.668985 13.2183612 Hexamita inflata 28002 Fornicata other_Eukaryota 48.1 0.0328   NR CAK8747863.1 28002 g2476 i0 26.5 0.814393939393939 215 111 81.1 9 129 770 564 732 CAK8747863.1 HINF_091615 [Hexamita inflata] diamond 645 48.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31778866 31778866 PRJNA1174234_P_NODE_5717_length_567_cov_1.836032_g5521_i0 PRJNA1174234 5717 567 1.836032 10.41030144 Hexamita inflata 28002 Fornicata other_Eukaryota 89.7 5.81e-19   NR CAK8791145.1 28002 g5521 i0 38.9 0.693121693121693 131 66 69.3 4 115 507 33 149 CAK8791145.1 HINF_096380 [Hexamita inflata] diamond 393 89.7 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;