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contig_metadata

27 rows where bioproject = "PRJNA1174234", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 27 ✖

tax_clade 1

  • Amoebozoa · 27 ✖

bioproject 1

  • PRJNA1174234 · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
316177 316177 PRJNA1174234_P_NODE_2361_length_831_cov_1.434037_g2198_i0 PRJNA1174234 2361 831 1.434037 11.91684747 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 237 3.23e-73   NR XP_004368288.1 1257118 g2198 i0 48.9 1.94945848375451 268 114 93.9 8 37 816 74 326 XP_004368288.1 cysteine proteinase precursor, putative [Acanthamoeba castellanii str. Neff] diamond 1620 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1590797 1590797 PRJNA1174234_P_NODE_30362_length_249_cov_0.875000_g30166_i0 PRJNA1174234 30362 249 0.875 2.17875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 235 2.08e-57   NTclustered gi|470430883|ref|XM_004338296.1| 1257118 g30166 i0 85.043 8.36947791164659 234 31 93 3 3 234 262 31 Acanthamoeba castellanii str. Neff 60S ribosomal protein L23, putative (ACA1_203760), partial mRNA blastn 2084 235 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5419286 5419286 PRJNA1174234_P_NODE_8465_length_473_cov_1.910000_g8269_i0 PRJNA1174234 8465 473 1.91 9.0343 Paramoeba branchiphila 308475 Discosea other_Eukaryota 296 1.93e-75   NTclustered gi|226347442|gb|FJ807261.1| 308475 g8269 i0 78.205 69.5813953488372 468 96 98 6 3 467 491 955 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 32912 296 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
9244021 9244021 PRJNA1174234_P_NODE_19368_length_313_cov_5.100000_g19172_i0 PRJNA1174234 19368 313 5.1 15.963 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 178 4.63e-40   NTclustered gi|470441658|ref|XM_004339391.1| 1257118 g19172 i0 79.468 31.258785942492 263 45 83 7 54 313 59 315 Acanthamoeba castellanii str. Neff ribosomal L5P family Cterminus, putative (ACA1_061660), partial mRNA blastn 9784 178 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10519671 10519671 PRJNA1174234_P_NODE_12709_length_386_cov_1.456869_g12513_i0 PRJNA1174234 12709 386 1.456869 5.62351434 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 181 1.0499999999999995e-55   NR XP_004345840.1 1257118 g12513 i0 78.6 7.54663212435233 117 25 90.9 0 2 352 1 117 XP_004345840.1 ribosomal protein S17, putative [Acanthamoeba castellanii str. Neff] diamond 2913 181 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14345131 14345131 PRJNA1174234_P_NODE_33792_length_244_cov_0.900585_g33596_i0 PRJNA1174234 33792 244 0.900585 2.1974274 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 81.3 1.17e-16   NR XP_004348701.1 1257118 g33596 i0 53.6 1.0327868852459 84 33 98.4 2 244 5 138 219 XP_004348701.1 Ras family protein [Acanthamoeba castellanii str. Neff] diamond 252 81.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20717539 20717539 PRJNA1174234_P_NODE_34197_length_243_cov_0.905882_g34001_i0 PRJNA1174234 34197 243 0.905882 2.20129326 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 114 2.35e-30   NR XP_004368153.1 1257118 g34001 i0 71.1 0.938271604938272 76 22 93.8 0 229 2 5 80 XP_004368153.1 ribosomal protein S17, putative [Acanthamoeba castellanii str. Neff] diamond 228 114 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26882470 26882470 PRJNA1174234_P_NODE_25541_length_272_cov_0.919598_g25345_i0 PRJNA1174234 25541 272 0.919598 2.50130656 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92.8 8e-20   NR XP_004344004.1 1257118 g25345 i0 56.8 0.816176470588235 74 32 81.6 0 48 269 301 374 XP_004344004.1 phosphoglycerate kinase [Acanthamoeba castellanii str. Neff] diamond 222 92.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27008744 27008744 PRJNA1174234_P_NODE_27102_length_262_cov_1.259259_g26906_i0 PRJNA1174234 27102 262 1.259259 3.29925858 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57 2.41e-7   NR XP_004348357.1 1257118 g26906 i0 43.3 0.687022900763359 60 34 68.7 0 198 19 28 87 XP_004348357.1 uncharacterized protein ACA1_325550 [Acanthamoeba castellanii str. Neff] diamond 180 57 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27040589 27040589 PRJNA1174234_P_NODE_29402_length_251_cov_0.865169_g29206_i0 PRJNA1174234 29402 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 100 1.13e-23   NR XP_004340152.1 1257118 g29206 i0 59 0.99203187250996006 83 27 99.2 1 2 250 105 180 XP_004340152.1 carnitine/acylcarnitine translocase, putative [Acanthamoeba castellanii str. Neff] diamond 249 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27818076 27818076 PRJNA1174234_P_NODE_19444_length_313_cov_1.129167_g19248_i0 PRJNA1174234 19444 313 1.129167 3.53429271 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 1.49e-28   NR XP_004337874.1 1257118 g19248 i0 63.8 1.73482428115016 94 28 88.2 3 276 1 1 90 XP_004337874.1 uncharacterized protein ACA1_187480 [Acanthamoeba castellanii str. Neff] diamond 543 110 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28480951 28480951 PRJNA1174234_P_NODE_7806_length_491_cov_1.322967_g7610_i0 PRJNA1174234 7806 491 1.322967 6.49576797 root 1 Root_unresolved Root_unresolved 133 3.86e-34   NR XP_004357191.1 1257118 g7610 i0 43.8 1.80855397148676 153 79 91 4 489 43 199 348 XP_004357191.1 ubiquitin-conjugating enzyme, putative [Acanthamoeba castellanii str. Neff] diamond 888 133 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28588258 28588258 PRJNA1174234_P_NODE_29507_length_250_cov_1.926554_g29311_i0 PRJNA1174234 29507 250 1.926554 4.816385 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 74.3 1.54e-13   NR XP_004341343.1 1257118 g29311 i0 53.1 0.768 64 30 76.8 0 219 28 228 291 XP_004341343.1 geranylgeranyl diphosphate synthase 1, putative [Acanthamoeba castellanii str. Neff] diamond 192 74.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29377389 29377389 PRJNA1174234_P_NODE_27429_length_260_cov_1.251337_g27233_i0 PRJNA1174234 27429 260 1.251337 3.2534762 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 59.3 5.37e-8   NR XP_004353045.1 1257118 g27233 i0 38.6 0.657692307692308 57 35 65.8 0 24 194 241 297 XP_004353045.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 171 59.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29882817 29882817 PRJNA1174234_P_NODE_24971_length_275_cov_1.440594_g24775_i0 PRJNA1174234 24971 275 1.440594 3.9616335 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 74.7 3.16e-13   NR XP_004335087.1 1257118 g24775 i0 39.6 1.88727272727273 91 50 99.3 2 1 273 1073 1158 XP_004335087.1 peroxidase [Acanthamoeba castellanii str. Neff] diamond 519 74.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30546075 30546075 PRJNA1174234_P_NODE_16933_length_335_cov_1.469466_g16737_i0 PRJNA1174234 16933 335 1.469466 4.9227111 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 134 1.47e-34   NR XP_004334901.1 1257118 g16737 i0 62.7 0.913432835820896 102 38 91.3 0 333 28 354 455 XP_004334901.1 plastin 3 (T isoform), putative [Acanthamoeba castellanii str. Neff] diamond 306 134 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30735578 30735578 PRJNA1174234_P_NODE_12014_length_397_cov_2.293210_g11818_i0 PRJNA1174234 12014 397 2.29321 9.1040437 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 128 2.57e-35   NR XP_004358072.1 1257118 g11818 i0 63.7 1.46599496221662 102 36 76.3 1 306 4 3 104 XP_004358072.1 ribosomal protein L31e, putative [Acanthamoeba castellanii str. Neff] diamond 582 128 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30786448 30786448 PRJNA1174234_P_NODE_21154_length_300_cov_1.674009_g20958_i0 PRJNA1174234 21154 300 1.674009 5.022027 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 114 2.25e-29   NR XP_004334896.1 1257118 g20958 i0 57 4.81 93 40 93 0 291 13 70 162 XP_004334896.1 ribosomal protein L6, putative [Acanthamoeba castellanii str. Neff] diamond 1443 115 0.991304347826087 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30988566 30988566 PRJNA1174234_P_NODE_30834_length_248_cov_1.320000_g30638_i0 PRJNA1174234 30834 248 1.32 3.2736 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 78.6 3.03e-16   NR XP_004334493.1 1257118 g30638 i0 48.5 0.798387096774194 66 34 79.8 0 214 17 82 147 XP_004334493.1 uncharacterized protein ACA1_330540 [Acanthamoeba castellanii str. Neff] diamond 198 78.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31177744 31177744 PRJNA1174234_P_NODE_5695_length_568_cov_2.711111_g5499_i0 PRJNA1174234 5695 568 2.711111 15.39911048 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87.4 2.21e-17   NR XP_004345357.1 1257118 g5499 i0 31.2 0.913732394366197 173 111 88.2 3 510 10 31 201 XP_004345357.1 uncharacterized protein ACA1_355970 [Acanthamoeba castellanii str. Neff] diamond 519 87.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31778856 31778856 PRJNA1174234_P_NODE_33397_length_244_cov_1.421053_g33201_i0 PRJNA1174234 33397 244 1.421053 3.46736932 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 126 2.18e-33   NR XP_004341702.1 1257118 g33201 i0 74.4 0.959016393442623 78 20 95.9 0 239 6 221 298 XP_004341702.1 uncharacterized protein ACA1_198300 [Acanthamoeba castellanii str. Neff] diamond 234 126 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31842019 31842019 PRJNA1174234_P_NODE_2597_length_798_cov_1.728276_g2431_i0 PRJNA1174234 2597 798 1.728276 13.79164248 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 198 2.5e-59   NR XP_004349741.1 1257118 g2431 i0 46.1 1.56766917293233 217 105 80.8 2 108 752 24 230 XP_004349741.1 uncharacterized protein ACA1_034610 [Acanthamoeba castellanii str. Neff] diamond 1251 198 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32190283 32190283 PRJNA1174234_P_NODE_16278_length_342_cov_1.486989_g16082_i0 PRJNA1174234 16278 342 1.486989 5.08550238 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.5 2.73e-7   NR XP_004348347.1 1257118 g16082 i0 36 0.657894736842105 75 46 65.8 1 108 332 28 100 XP_004348347.1 CBS domain containing protein [Acanthamoeba castellanii str. Neff] diamond 225 58.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32348689 32348689 PRJNA1174234_P_NODE_34519_length_243_cov_0.905882_g34323_i0 PRJNA1174234 34519 243 0.905882 2.20129326 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.5 5.35e-12   NR XP_004337641.1 1257118 g34323 i0 48.8 1.01234567901235 82 39 98.8 2 241 2 114 194 XP_004337641.1 SPRY domain containing protein [Acanthamoeba castellanii str. Neff] diamond 246 70.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32411843 32411843 PRJNA1174234_P_NODE_30999_length_248_cov_0.880000_g30803_i0 PRJNA1174234 30999 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 81.6 5.5e-16   NR XP_004368304.1 1257118 g30803 i0 51.2 0.991935483870968 82 37 99.2 2 248 3 184 262 XP_004368304.1 aminotransferase, class I/II superfamily protein [Acanthamoeba castellanii str. Neff] diamond 246 81.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32475195 32475195 PRJNA1174234_P_NODE_31939_length_247_cov_0.885057_g31743_i0 PRJNA1174234 31939 247 0.885057 2.18609079 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 61.2 4.47e-9   NR XP_004352520.1 1257118 g31743 i0 37.5 1.97975708502024 80 50 97.2 0 7 246 83 162 XP_004352520.1 uncharacterized protein ACA1_360590 [Acanthamoeba castellanii str. Neff] diamond 489 61.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32494409 32494409 PRJNA1174234_P_NODE_34879_length_242_cov_0.911243_g34683_i0 PRJNA1174234 34879 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 45.8 0.00297   NR XP_004358245.1 1257118 g34683 i0 42 2.78925619834711 81 36 91.7 5 21 242 420 496 XP_004358245.1 transcriptional regulator, Sir2 family protein [Acanthamoeba castellanii str. Neff] diamond 675 45.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;