RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1174207" and tax_phylum = "Haptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Haptophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1174207 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29851100 29851100 PRJNA1174207_P_NODE_33331_length_251_cov_1.297753_g32802_i0 PRJNA1174207 33331 251 1.297753 3.25736003 Chrysochromulina tobinii 1460289 Haptophyta other_Eukaryota 68.9 2.39e-11   NR KOO25806.1 1460289 g32802 i0 39 2.9402390438247 82 50 98 0 1 246 317 398 KOO25806.1 amine oxidase [Chrysochromulina tobinii] diamond 738 68.9 1 Eukaryota Haptista   Haptophyta   Prymnesiales Chrysochromulinaceae Chrysochromulina Chrysochromulina tobinii
31304403 31304403 PRJNA1174207_P_NODE_30575_length_262_cov_1.629630_g30046_i0 PRJNA1174207 30575 262 1.62963 4.2696306 Prymnesium parvum 97485 Haptophyta other_Eukaryota 139 2.14e-39   NR KAL1525517.1 97485 g30046 i0 81.9 7.2824427480916 83 15 95 0 12 260 38 120 KAL1525517.1 hypothetical protein AB1Y20_020373 [Prymnesium parvum] diamond 1908 139 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;