RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1174207", tax_phylum = "Cossaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1174207 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13069215 13069215 PRJNA1174207_P_NODE_27371_length_275_cov_2.935644_g26842_i0 PRJNA1174207 27371 275 2.935644 8.073021 Mupapillomavirus 2 334204 Viruses Viruses 508 1.2499999999999999e-139   NTclustered gi|9626605|ref|NC_001458.1| 28311 g26842 i0 100 1 275 0 100 0 1 275 866 1140 Human papillomavirus type 63, complete genome blastn 275 508 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Mupapillomavirus Mupapillomavirus 2
13069232 13069232 PRJNA1174207_P_NODE_28111_length_272_cov_2.095477_g27582_i0 PRJNA1174207 28111 272 2.095477 5.69969744 Mupapillomavirus 2 334204 Viruses Viruses 503 5.729999999999998e-138   NTclustered gi|9626605|ref|NC_001458.1| 28311 g27582 i0 100 1 272 0 100 0 1 272 4200 3929 Human papillomavirus type 63, complete genome blastn 272 503 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Mupapillomavirus Mupapillomavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;