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contig_metadata

16 rows where bioproject = "PRJNA1174207", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 16 ✖

tax_kingdom 1

  • Pseudomonadati · 16 ✖

bioproject 1

  • PRJNA1174207 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1590589 1590589 PRJNA1174207_P_NODE_43302_length_226_cov_2.013072_g42773_i0 PRJNA1174207 43302 226 2.013072 4.54954272 Oligoflexales bacterium 2687297 Bacteria Bacteria 76.3 1.47e-14   NR MBP9708592.1 2687297 g42773 i0 51.4 0.982300884955752 74 36 98.2 0 224 3 50 123 MBP9708592.1 hypothetical protein [Oligoflexales bacterium] diamond 222 76.3 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales     Oligoflexales bacterium
4142403 4142403 PRJNA1174207_P_NODE_21424_length_308_cov_3.165957_g20895_i0 PRJNA1174207 21424 308 3.165957 9.75114756 Bdellovibrio sp. HCB337 3394358 Bacteria Bacteria 424 5.29e-114   NTclustered gi|2895525383|gb|CP178621.1| 3394358 g20895 i0 91.558 197.918831168831 308 25 99 1 2 308 3446110 3446417 Bdellovibrio sp. HCB337 chromosome, complete genome blastn 60959 424 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB337
6143557 6143557 PRJNA1174207_P_NODE_32725_length_253_cov_1.711111_g32196_i0 PRJNA1174207 32725 253 1.711111 4.32911083 Pseudomonadati 3379134 Bacteria Bacteria 340 4.379999999999999e-89   NTclustered gi|469926873|gb|CP003538.1| 349215 g32196 i0 91.235 283.766798418972 251 20 99 2 1 251 463138 463386 Micavibrio aeruginosavorus EPB, complete genome blastn 71793 342 0.994152046783626 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
10519286 10519286 PRJNA1174207_P_NODE_29429_length_267_cov_1.381443_g28900_i0 PRJNA1174207 29429 267 1.381443 3.68845281 Bdellovibrio bacteriovorus 959 Bacteria Bacteria 416 7.519999999999998e-112   NTclustered gi|2800948966|gb|CP168973.1| 959 g28900 i0 95.076 153.625468164794 264 13 99 0 1 264 1677242 1677505 Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome blastn 41018 416 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
11794114 11794114 PRJNA1174207_P_NODE_20850_length_310_cov_3.312236_g20321_i0 PRJNA1174207 20850 310 3.312236 10.2679316 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 85.9 4.6e-17   NR MCB0406681.1 2053517 g20321 i0 69.4 1.42258064516129 49 15 47.4 0 309 163 102 150 MCB0406681.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Bdellovibrionales bacterium] diamond 441 85.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
15618259 15618259 PRJNA1174207_P_NODE_20413_length_313_cov_2.275000_g19884_i0 PRJNA1174207 20413 313 2.275 7.12075 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 171 5.209999999999999e-52   NR MCB0370127.1 2053517 g19884 i0 78.6 3.94888178913738 103 22 98.7 0 311 3 59 161 MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] diamond 1236 171 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27040550 27040550 PRJNA1174207_P_NODE_40642_length_242_cov_0.911243_g40113_i0 PRJNA1174207 40642 242 0.911243 2.20520806 Bdellovibrionales bacterium CG22_combo_CG1 2053517 Bacteria Bacteria 55.8 8.09e-7   NR PIP89443.1 1973930 g40113 i0 39.5 0.942148760330578 76 46 94.2 0 15 242 159 234 PIP89443.1 MAG: alkane 1-monooxygenase [Bdellovibrionales bacterium CG22_combo_CG10-13_8_21_14_all_38_13] diamond 228 55.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium CG22_combo_CG10-13_8_21_14_all_38_13
28859693 28859693 PRJNA1174207_P_NODE_25028_length_285_cov_2.542453_g24499_i0 PRJNA1174207 25028 285 2.542453 7.24599105 root 1 Root_unresolved Root_unresolved 68.6 7.45e-12   NR MDH4468212.1 2081706 g24499 i0 40.4 3.03157894736842 94 50 98.9 2 283 2 96 183 MDH4468212.1 lipocalin family protein [Bacteriovoracaceae bacterium] diamond 864 68.9 0.995645863570392 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
29207298 29207298 PRJNA1174207_P_NODE_32309_length_255_cov_1.439560_g31780_i0 PRJNA1174207 32309 255 1.43956 3.670878 Pseudomonadati 3379134 Bacteria Bacteria 81.3 1.19e-15   NR QQG36778.1 349221 g31780 i0 77.1 1.72941176470588 48 11 56.5 0 253 110 271 318 QQG36778.1 MAG: uroporphyrinogen-III synthase [Micavibrio aeruginosavorus] diamond 441 81.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
29440192 29440192 PRJNA1174207_P_NODE_40750_length_242_cov_0.911243_g40221_i0 PRJNA1174207 40750 242 0.911243 2.20520806 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 140 5.82e-37   NR MBX3022978.1 2053517 g40221 i0 78.8 0.991735537190083 80 17 99.2 0 240 1 85 164 MBX3022978.1 4Fe-4S dicluster domain-containing protein [Bdellovibrionales bacterium] diamond 240 140 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30040535 30040535 PRJNA1174207_P_NODE_18331_length_332_cov_1.521236_g17802_i0 PRJNA1174207 18331 332 1.521236 5.05050352 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 139 3.68e-39   NR MCB0369154.1 2053517 g17802 i0 64.4 0.939759036144578 104 37 94 0 328 17 56 159 MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] diamond 312 139 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31020072 31020072 PRJNA1174207_P_NODE_22855_length_297_cov_1.937500_g22326_i0 PRJNA1174207 22855 297 1.9375 5.754375 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 68.6 2.59e-11   NR HEY8279801.1 3034175 g22326 i0 44.1 1.92929292929293 93 52 93.9 0 19 297 18 110 HEY8279801.1 tetratricopeptide repeat protein [Bdellovibrionota bacterium] diamond 573 68.6 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
31810535 31810535 PRJNA1174207_P_NODE_41057_length_241_cov_2.434524_g40528_i0 PRJNA1174207 41057 241 2.434524 5.86720284 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 99.4 3.0099999999999997e-25   NR MCB0369232.1 2053517 g40528 i0 57.5 0.908713692946058 73 31 90.9 0 17 235 5 77 MCB0369232.1 hypothetical protein [Bdellovibrionales bacterium] diamond 219 99.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31841978 31841978 PRJNA1174207_P_NODE_35097_length_249_cov_0.875000_g34568_i0 PRJNA1174207 35097 249 0.875 2.17875 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 147 6.489999999999998e-42   NR MBX3021450.1 2053517 g34568 i0 75.6 1.98795180722892 82 20 98.8 0 249 4 155 236 MBX3021450.1 class I SAM-dependent methyltransferase [Bdellovibrionales bacterium] diamond 495 147 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32475132 32475132 PRJNA1174207_P_NODE_22959_length_296_cov_2.986547_g22430_i0 PRJNA1174207 22959 296 2.986547 8.84017912 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 116 4.37e-28   NR NUM88387.1 2053517 g22430 i0 47.7 7.98648648648649 132 34 98.3 1 295 5 196 327 NUM88387.1 efflux RND transporter permease subunit [Bdellovibrionales bacterium] diamond 2364 116 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32526176 32526176 PRJNA1174207_P_NODE_38099_length_245_cov_0.895349_g37570_i0 PRJNA1174207 38099 245 0.895349 2.19360505 Pseudomonadati 3379134 Bacteria Bacteria 112 1.6e-26   NR MBL7557774.1 2026715 g37570 i0 72.2 3.72244897959184 79 18 96.7 1 8 244 264 338 MBL7557774.1 DNA translocase FtsK 4TM domain-containing protein [Pseudobdellovibrionaceae bacterium] diamond 912 112 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;