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contig_metadata

19 rows where bioproject = "PRJNA1174207", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 19 ✖

tax_kingdom 1

  • Orthornavirae · 19 ✖

bioproject 1

  • PRJNA1174207 · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1040785 1040785 PRJNA1174207_P_NODE_43381_length_223_cov_4.086667_g42852_i0 PRJNA1174207 43381 223 4.086667 9.11326741 Tobamovirus 12234 Viruses Viruses 411 2.84e-110   NTclustered gi|2647550519|gb|OR843964.1| 12242 g42852 i0 100 99.5515695067265 222 0 99 0 1 222 2340 2561 Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds blastn 22200 411 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
2315956 2315956 PRJNA1174207_P_NODE_32482_length_254_cov_1.701657_g31953_i0 PRJNA1174207 32482 254 1.701657 4.32220878 Tobamovirus 12234 Viruses Viruses 470 5.37e-128   NTclustered gi|2647550519|gb|OR843964.1| 12242 g31953 i0 100 100 254 0 100 0 1 254 1567 1820 Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds blastn 25400 470 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
2316205 2316205 PRJNA1174207_P_NODE_9902_length_487_cov_2.202899_g9376_i0 PRJNA1174207 9902 487 2.202899 10.72811813 Tobamovirus 12234 Viruses Viruses 893 0   NTclustered gi|1805995756|gb|MN882044.1| 1761477 g9376 i0 99.794 99.7946611909651 486 1 99 0 2 487 6323 5838 Tomato brown rugose fruit virus isolate 39563388_A, complete genome blastn 48600 893 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
3591183 3591183 PRJNA1174207_P_NODE_3763_length_921_cov_3.476415_g3323_i0 PRJNA1174207 3763 921 3.476415 32.01778215 Alphavirus 11019 Viruses Viruses 1696 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g3323 i0 99.891 99.9978284473398 921 1 100 0 1 921 4931 5851 Getah virus strain M1, complete genome blastn 92098 1701 0.997060552616108 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
3591243 3591243 PRJNA1174207_P_NODE_42983_length_228_cov_3.432258_g42454_i0 PRJNA1174207 42983 228 3.432258 7.82554824 Tobamovirus 12234 Viruses Viruses 422 1.34e-113   NTclustered gi|2701262864|gb|PP481220.1| 12253 g42454 i0 100 100 228 0 100 0 1 228 3109 3336 Tomato mosaic virus isolate INIFAP JM3, complete genome blastn 22800 422 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
3591376 3591376 PRJNA1174207_P_NODE_983_length_1940_cov_5.472951_g793_i0 PRJNA1174207 983 1940 5.472951 106.1752494 Alphavirus 11019 Viruses Viruses 3572 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g793 i0 99.897 100.148453608247 1940 2 100 0 1 1940 5890 7829 Getah virus strain M1, complete genome blastn 194288 3572 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
6143296 6143296 PRJNA1174207_P_NODE_15385_length_368_cov_1.345763_g14856_i0 PRJNA1174207 15385 368 1.345763 4.95240784 Tobamovirus 12234 Viruses Viruses 675 0   NTclustered gi|2701262864|gb|PP481220.1| 12253 g14856 i0 99.728 98.991847826087 368 1 100 0 1 368 4782 4415 Tomato mosaic virus isolate INIFAP JM3, complete genome blastn 36429 680 0.992647058823529 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
6143458 6143458 PRJNA1174207_P_NODE_25945_length_281_cov_4.389423_g25416_i0 PRJNA1174207 25945 281 4.389423 12.33427863 Tobamovirus 12234 Viruses Viruses 520 5.909999999999999e-143   NTclustered gi|2647550519|gb|OR843964.1| 12242 g25416 i0 100 100 281 0 100 0 1 281 2227 1947 Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds blastn 28100 520 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
11243714 11243714 PRJNA1174207_P_NODE_15229_length_370_cov_1.821549_g14700_i0 PRJNA1174207 15229 370 1.821549 6.7397313 Tobamovirus 12234 Viruses Viruses 673 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g14700 i0 99.459 100 370 2 100 0 1 370 5394 5763 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 37000 673 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
11244120 11244120 PRJNA1174207_P_NODE_609_length_2460_cov_4.854629_g475_i0 PRJNA1174207 609 2460 4.854629 119.4238734 Alphavirus 11019 Viruses Viruses 4521 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g475 i0 99.837 99.8642276422764 2460 4 100 0 1 2460 11369 8910 Getah virus strain M1, complete genome blastn 245666 4538 0.996253856324372 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
14344610 14344610 PRJNA1174207_P_NODE_27892_length_273_cov_2.035000_g27363_i0 PRJNA1174207 27892 273 2.035 5.55555 Tobamovirus capsici 3432865 Viruses Viruses 503 5.76e-138   NTclustered gi|2431684801|gb|ON557629.1| 12239 g27363 i0 100 99.5347985347985 272 0 99 0 1 272 4497 4768 Pepper mild mottle virus isolate G07, partial genome blastn 27173 503 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus capsici
15068297 15068297 PRJNA1174207_P_NODE_28172_length_272_cov_1.547739_g27643_i0 PRJNA1174207 28172 272 1.547739 4.20985008 Tobamovirus 12234 Viruses Viruses 501 2.06e-137   NTclustered gi|16580717|emb|AJ417701.1| 12253 g27643 i0 100 99.5073529411765 271 0 99 0 1 271 2142 2412 Tomato mosaic virus camellia strain, complete genome blastn 27066 501 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
16342922 16342922 PRJNA1174207_P_NODE_13793_length_393_cov_1.925000_g13264_i0 PRJNA1174207 13793 393 1.925 7.56525 Tobamovirus 12234 Viruses Viruses 721 0   NTclustered gi|2837380181|gb|PP099897.1| 1761477 g13264 i0 99.746 100 393 1 100 0 1 393 3833 3441 Tomato brown rugose fruit virus isolate NPPO-NL 36648757, complete genome blastn 39300 721 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
16343167 16343167 PRJNA1174207_P_NODE_3013_length_1056_cov_2.970498_g2607_i0 PRJNA1174207 3013 1056 2.970498 31.36845888 Alphavirus 11019 Viruses Viruses 1945 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g2607 i0 99.905 99.9943181818182 1056 1 100 0 1 1056 3920 4975 Getah virus strain M1, complete genome blastn 105594 1945 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
17618184 17618184 PRJNA1174207_P_NODE_1314_length_1675_cov_2.543071_g1070_i0 PRJNA1174207 1314 1675 2.543071 42.59643925 Alphavirus 11019 Viruses Viruses 3094 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g1070 i0 100 99.9982089552239 1675 0 100 0 1 1675 2264 3938 Getah virus strain M1, complete genome blastn 167497 3094 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
22717305 22717305 PRJNA1174207_P_NODE_12918_length_408_cov_2.743284_g12391_i0 PRJNA1174207 12918 408 2.743284 11.19259872 Alphavirus 11019 Viruses Viruses 749 0   NTclustered gi|52631669|gb|AY702913.1| 59300 g12391 i0 99.755 99.4656862745098 408 1 100 0 1 408 409 2 Getah virus from South Korea, complete genome blastn 40582 749 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
23992517 23992517 PRJNA1174207_P_NODE_10419_length_471_cov_1.467337_g9893_i0 PRJNA1174207 10419 471 1.467337 6.91115727 Alphavirus 11019 Viruses Viruses 870 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g9893 i0 100 100 471 0 100 0 1 471 1298 1768 Getah virus strain M1, complete genome blastn 47100 870 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
25267160 25267160 PRJNA1174207_P_NODE_8560_length_536_cov_1.341253_g8036_i0 PRJNA1174207 8560 536 1.341253 7.18911608 Alphavirus 11019 Viruses Viruses 974 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g8036 i0 99.44 99.9365671641791 536 3 100 0 1 536 8807 8272 Getah virus strain M1, complete genome blastn 53566 974 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
29030281 29030281 PRJNA1174207_P_NODE_35588_length_248_cov_1.554286_g35059_i0 PRJNA1174207 35588 248 1.554286 3.85462928 Erysiphe necator associated virga-like virus 13 2743128 Viruses Viruses 57.4 2.78e-7   NR QKN22650.1 2743128 g35059 i0 48.3 0.725806451612903 60 31 72.6 0 3 182 1103 1162 QKN22650.1 RNA-dependent RNA polymerase [Erysiphe necator associated virga-like virus 13] diamond 180 57.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Erysiphe necator associated virga-like virus 13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;