RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1174207" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1174207 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16343068 16343068 PRJNA1174207_P_NODE_22813_length_297_cov_4.169643_g22284_i0 PRJNA1174207 22813 297 4.169643 12.38383971 Methanosarcina 2207 Archaea Archaea 549 8.029999999999997e-152   NTclustered gi|827396966|gb|CP008746.1| 796385 g22284 i0 100 40.2592592592593 297 0 100 0 1 297 4158835 4158539 Methanosarcina barkeri CM1, complete genome blastn 11957 549 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri
32253791 32253791 PRJNA1174207_P_NODE_26338_length_280_cov_1.386473_g25809_i0 PRJNA1174207 26338 280 1.386473 3.8821244 Methanobacteriota archaeon 2026739 Archaea Archaea 43.1 0.0272   NR MAV06623.1 2026739 g25809 i0 31 0.9 84 52 86.8 3 266 24 101 181 MAV06623.1 hypothetical protein [Methanobacteriota archaeon] diamond 252 43.1 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;