RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1174207", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1174207 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8693500 8693500 PRJNA1174207_P_NODE_22147_length_302_cov_2.545852_g21618_i0 PRJNA1174207 22147 302 2.545852 7.68847304 Metazoa 33208 Annelida Annelida 150 9.689999999999999e-32   NTclustered gi|37785583|gb|AY210470.1| 6426 g21618 i0 83.636 54.9072847682119 165 21 54 5 1 163 1180 1020 Riftia pachyptila 28S ribosomal RNA gene, partial sequence blastn 16582 150 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Riftia Riftia pachyptila
28291341 28291341 PRJNA1174207_P_NODE_27006_length_277_cov_1.509804_g26477_i0 PRJNA1174207 27006 277 1.509804 4.18215708 Opisthokonta 33154 Annelida Annelida 132 2.52e-36   NR XP_009029853.1 6412 g26477 i0 71.1 38.0361010830325 90 26 97.5 0 275 6 58 147 XP_009029853.1 hypothetical protein HELRODRAFT_186175 [Helobdella robusta] diamond 10536 132 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;