RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1174207", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 5 ✖

tax_kingdom 1

  • Bacillati · 5 ✖

bioproject 1

  • PRJNA1174207 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5418522 5418522 PRJNA1174207_P_NODE_18105_length_334_cov_3.210728_g17576_i0 PRJNA1174207 18105 334 3.210728 10.72383152 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 329 1.3e-85   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g17576 i0 86.799 160.026946107784 303 31 90 7 1 300 5031250 5031546 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 53449 329 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
14344354 14344354 PRJNA1174207_P_NODE_13872_length_391_cov_3.075472_g13343_i0 PRJNA1174207 13872 391 3.075472 12.02509552 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 510 5.13e-140   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g13343 i0 90.698 205.462915601023 387 30 98 5 6 390 5032794 5033176 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 80336 510 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
16892412 16892412 PRJNA1174207_P_NODE_11874_length_432_cov_1.069638_g11347_i0 PRJNA1174207 11874 432 1.069638 4.62083616 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 604 2.549999999999999e-168   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g11347 i0 91.917 679.990740740741 433 33 100 2 1 432 5033756 5033325 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 293756 604 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
23267592 23267592 PRJNA1174207_P_NODE_15779_length_362_cov_2.906574_g15250_i0 PRJNA1174207 15779 362 2.906574 10.52179788 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 562 1.28e-155   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g15250 i0 95.238 789.080110497238 357 14 99 2 6 362 5032722 5032369 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 285647 562 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
24541637 24541637 PRJNA1174207_P_NODE_29780_length_265_cov_3.052083_g29251_i0 PRJNA1174207 29780 265 3.052083 8.08801995 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 390 4.519999999999999e-104   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g29251 i0 93.208 565.516981132075 265 18 100 0 1 265 5032049 5032313 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 149862 390 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;