contig_metadata
8 rows where bioproject = "PRJNA1174207", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4142566 | 4142566 | PRJNA1174207_P_NODE_29584_length_266_cov_1.637306_g29055_i0 | PRJNA1174207 | 29584 | 266 | 1.637306 | 4.35523396 | Metamycoplasma orale | 2121 | Bacteria | Bacteria | 490 | 4.349999999999999e-134 | NTclustered | gi|1563679895|emb|LR214940.1| | 2121 | g29055 | i0 | 100 | 156.390977443609 | 265 | 0 | 99 | 0 | 2 | 266 | 699299 | 699035 | Mycoplasma orale strain NCTC10112 genome assembly, chromosome: 1 | blastn | 41600 | 490 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma orale | |||
| 6143575 | 6143575 | PRJNA1174207_P_NODE_33905_length_250_cov_2.418079_g33376_i0 | PRJNA1174207 | 33905 | 250 | 2.418079 | 6.0451975 | Mollicutes | 31969 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|281186773|gb|GU227378.1| | 2100 | g33376 | i0 | 100 | 100.996 | 250 | 0 | 100 | 0 | 1 | 250 | 1182 | 933 | Mycoplasma hyorhinis strain USP36P 16S ribosomal RNA gene, partial sequence | blastn | 25249 | 462 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 6143650 | 6143650 | PRJNA1174207_P_NODE_42605_length_232_cov_3.591195_g42076_i0 | PRJNA1174207 | 42605 | 232 | 3.591195 | 8.3315724 | Mycoplasma | 2093 | Bacteria | Bacteria | 422 | 1.37e-113 | NTclustered | gi|365822471|gb|JN935874.1| | 51364 | g42076 | i0 | 99.567 | 128.452586206897 | 231 | 1 | 99 | 0 | 1 | 231 | 1097 | 1327 | Mycoplasma cottewii strain VIS 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 29801 | 422 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 10519252 | 10519252 | PRJNA1174207_P_NODE_27649_length_274_cov_1.990050_g27120_i0 | PRJNA1174207 | 27649 | 274 | 1.99005 | 5.452737 | Mycoplasma cottewii | 51364 | Bacteria | Bacteria | 499 | 7.48e-137 | NTclustered | gi|2294785939|gb|CP103424.1| | 51364 | g27120 | i0 | 99.634 | 192.846715328467 | 273 | 1 | 99 | 0 | 2 | 274 | 270742 | 270470 | Mycoplasma cottewii strain VIS chromosome, complete genome | blastn | 52840 | 499 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 13793924 | 13793924 | PRJNA1174207_P_NODE_27891_length_273_cov_2.055000_g27362_i0 | PRJNA1174207 | 27891 | 273 | 2.055 | 5.61015 | Mycoplasma | 2093 | Bacteria | Bacteria | 494 | 3.46e-135 | NTclustered | gi|54609775|gb|AY765214.1| | 51364 | g27362 | i0 | 99.267 | 187.73260073260099 | 273 | 2 | 100 | 0 | 1 | 273 | 450 | 722 | Mycoplasma cottewii strain ATCC 43093 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 51251 | 494 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 13794016 | 13794016 | PRJNA1174207_P_NODE_35871_length_248_cov_0.880000_g35342_i0 | PRJNA1174207 | 35871 | 248 | 0.88 | 2.1824 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 457 | 4.07e-124 | NTclustered | gi|1720621726|gb|CP035041.1| | 2100 | g35342 | i0 | 100 | 16.3629032258065 | 247 | 0 | 99 | 0 | 2 | 248 | 32958 | 32712 | Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome | blastn | 4058 | 457 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 27735847 | 27735847 | PRJNA1174207_P_NODE_42084_length_237_cov_4.835366_g41555_i0 | PRJNA1174207 | 42084 | 237 | 4.835366 | 11.45981742 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 130 | 2.09e-33 | NR | WP_206602618.1 | 2094 | g41555 | i0 | 94.2 | 6.9746835443038 | 69 | 4 | 87.3 | 0 | 236 | 30 | 292 | 360 | WP_206602618.1 NADH-quinone oxidoreductase subunit A [Mycoplasmopsis arginini] | diamond | 1653 | 130 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 30293678 | 30293678 | PRJNA1174207_P_NODE_35032_length_249_cov_0.875000_g34503_i0 | PRJNA1174207 | 35032 | 249 | 0.875 | 2.17875 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 80.1 | 3.39e-17 | NR | MFU8793578.1 | 1898209 | g34503 | i0 | 47.4 | 0.939759036144578 | 78 | 41 | 94 | 0 | 235 | 2 | 1 | 78 | MFU8793578.1 hypothetical protein [Acholeplasmataceae bacterium] | diamond | 234 | 80.1 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;