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contig_metadata

20 rows where bioproject = "PRJNA1174207" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 20 ✖

bioproject 1

  • PRJNA1174207 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
315865 315865 PRJNA1174207_P_NODE_36741_length_247_cov_0.885057_g36212_i0 PRJNA1174207 36741 247 0.885057 2.18609079 Haematococcus lacustris 44745 Plants Plants 110 4.95e-28   NR KAJ9523538.1 44745 g36212 i0 65.9 2.97570850202429 82 28 99.6 0 2 247 67 148 KAJ9523538.1 hypothetical protein QJQ45_007182 [Haematococcus lacustris] diamond 735 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
4142430 4142430 PRJNA1174207_P_NODE_22864_length_297_cov_1.718750_g22335_i0 PRJNA1174207 22864 297 1.71875 5.1046875 Eukaryota 2759 Plants Plants 167 3.65e-48   NR KAI3426228.1 3077 g22335 i0 79.6 31.6565656565657 98 20 99 0 295 2 35 132 KAI3426228.1 hypothetical protein D9Q98_008604 [Chlorella vulgaris] diamond 9402 167 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
4868851 4868851 PRJNA1174207_P_NODE_43724_length_204_cov_4.251908_g43195_i0 PRJNA1174207 43724 204 4.251908 8.67389232 root 1 Root_unresolved Root_unresolved 287 4.479999999999999e-73   NTclustered gi|1169296931|gb|KY364701.1| 63676 g43195 i0 92.233 100.78431372549 206 10 99 6 1 203 4838 5040 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 20560 287 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
10519392 10519392 PRJNA1174207_P_NODE_35309_length_249_cov_0.875000_g34780_i0 PRJNA1174207 35309 249 0.875 2.17875 Eukaryota 2759 Plants Plants 115 1.12e-30   NR PNG93953.1 47790 g34780 i0 67.1 4.85542168674699 82 24 98.8 1 2 247 89 167 PNG93953.1 Guanine nucleotide-binding protein subunit beta-like protein, partial [Tetrabaena socialis] diamond 1209 115 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
10519414 10519414 PRJNA1174207_P_NODE_36149_length_248_cov_0.880000_g35620_i0 PRJNA1174207 36149 248 0.88 2.1824 Ostreobium quekettii 121088 Plants Plants 84 1.23e-16   NR CAD7696847.1 121088 g35620 i0 50 0.943548387096774 78 39 94.4 0 235 2 486 563 CAD7696847.1 unnamed protein product [Ostreobium quekettii] diamond 234 84 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
11794520 11794520 PRJNA1174207_P_NODE_42970_length_229_cov_2.205128_g42441_i0 PRJNA1174207 42970 229 2.205128 5.04974312 Chloromonas actinochloris 158501 Plants Plants 274 4.0099999999999997e-69   NTclustered gi|66864280|gb|DQ015735.1| 158501 g42441 i0 88.261 100.2096069869 230 25 100 2 1 229 1624 1396 Chloromonas actinochloris strain SAG 1.72 26S ribosomal RNA gene, partial sequence blastn 22948 274 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chloromonas Chloromonas actinochloris
13793835 13793835 PRJNA1174207_P_NODE_20671_length_311_cov_1.995798_g20142_i0 PRJNA1174207 20671 311 1.995798 6.20693178 Jaagichlorella 2304164 Plants Plants 564 3.02e-156   NTclustered gi|1802907783|gb|MT006204.1| 2704669 g20142 i0 99.357 99.7781350482315 311 2 100 0 1 311 3193 3503 Jaagichlorella nagensis strain FACHB-2415 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 31031 564 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Jaagichlorella Jaagichlorella nagensis
15068493 15068493 PRJNA1174207_P_NODE_43552_length_213_cov_4.600000_g43023_i0 PRJNA1174207 43552 213 4.6 9.798 Watanabeaceae 2981775 Plants Plants 383 5.8499999999999996e-102   NTclustered gi|1561005731|gb|MG493347.1| 167235 g43023 i0 99.061 99.6244131455399 213 2 100 0 1 213 109 321 Uncultured Trebouxiophyceae clone LSY2026 18S ribosomal RNA gene, partial sequence blastn 21220 383 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       uncultured Trebouxiophyceae
16343185 16343185 PRJNA1174207_P_NODE_31433_length_258_cov_3.405405_g30904_i0 PRJNA1174207 31433 258 3.405405 8.7859449 root 1 Root_unresolved Root_unresolved 455 1.53e-123   NTclustered gi|1714003650|gb|MN243923.1| 3079 g30904 i0 98.456 100.352713178295 259 3 100 1 1 258 876 618 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 25891 455 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
23992668 23992668 PRJNA1174207_P_NODE_18199_length_333_cov_4.519231_g17670_i0 PRJNA1174207 18199 333 4.5192310000000004 15.04903923 Trebouxiophyceae 75966 Plants Plants 599 8.94e-167   NTclustered gi|148763239|gb|EF595524.1| 445995 g17670 i0 99.102 101.765765765766 334 2 100 1 1 333 1329 996 Heveochlorella hainangensis strain FGG01 18S ribosomal RNA gene, complete sequence blastn 33888 604 0.991721854304636 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Jaagichlorella Jaagichlorella hainangensis
26787437 26787437 PRJNA1174207_P_NODE_27921_length_273_cov_1.740000_g27392_i0 PRJNA1174207 27921 273 1.74 4.7502 Raphidocelis subcapitata 307507 Plants Plants 150 6.01e-44   NR GBF94441.1 307507 g27392 i0 75.6 9.89010989010989 90 22 98.9 0 2 271 75 164 GBF94441.1 40S ribosomal protein SA [Raphidocelis subcapitata] diamond 2700 150 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
28101877 28101877 PRJNA1174207_P_NODE_36465_length_247_cov_1.327586_g35936_i0 PRJNA1174207 36465 247 1.327586 3.27913742 Chlamydomonadales 3042 Plants Plants 60.8 1.47e-8   NR KAJ9515922.1 44745 g35936 i0 40.7 3.8502024291498 81 40 98.4 1 246 4 47 119 KAJ9515922.1 hypothetical protein QJQ45_016906, partial [Haematococcus lacustris] diamond 951 61.2 0.993464052287582 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
28808707 28808707 PRJNA1174207_P_NODE_34748_length_249_cov_1.750000_g34219_i0 PRJNA1174207 34748 249 1.75 4.3575 Monoraphidium neglectum 145388 Plants Plants 94.4 1.28e-20   NR XP_013899781.1 145388 g34219 i0 59.8 1.97590361445783 82 32 97.6 1 249 7 197 278 XP_013899781.1 hypothetical protein MNEG_7198 [Monoraphidium neglectum] diamond 492 94.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
28828084 28828084 PRJNA1174207_P_NODE_40868_length_242_cov_0.911243_g40339_i0 PRJNA1174207 40868 242 0.911243 2.20520806 Eukaryota 2759 Plants Plants 60.5 1.98e-8   NR XP_042924973.1 3055 g40339 i0 56.8 1.10330578512397 44 19 54.5 0 239 108 167 210 XP_042924973.1 uncharacterized protein CHLRE_04g216902v5 [Chlamydomonas reinhardtii] diamond 267 60.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
29049364 29049364 PRJNA1174207_P_NODE_16468_length_353_cov_2.375000_g15939_i0 PRJNA1174207 16468 353 2.375 8.38375 Chlorophyceae 3166 Plants Plants 144 4.76e-41   NR WIA41816.1 3088 g15939 i0 63.6 1.8356940509915 110 40 93.5 0 23 352 35 144 WIA41816.1 hypothetical protein OEZ86_009147 [Tetradesmus obliquus] diamond 648 144 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29535228 29535228 PRJNA1174207_P_NODE_37890_length_245_cov_2.133721_g37361_i0 PRJNA1174207 37890 245 2.133721 5.22761645 Pedinophyceae sp. YPF-7 765719 Plants Plants 104 1.81e-24   NR CAG9466458.1 765719 g37361 i0 66.7 0.991836734693878 81 27 99.2 0 245 3 106 186 CAG9466458.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 243 104 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
30072014 30072014 PRJNA1174207_P_NODE_22992_length_296_cov_1.982063_g22463_i0 PRJNA1174207 22992 296 1.982063 5.86690648 Chlamydomonas eustigma 1157962 Plants Plants 49.3 1.21e-4   NR GAX83281.1 1157962 g22463 i0 33.8 0.780405405405405 77 51 78 0 30 260 33 109 GAX83281.1 hypothetical protein CEUSTIGMA_g10707.t1 [Chlamydomonas eustigma] diamond 231 49.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
30344688 30344688 PRJNA1174207_P_NODE_13452_length_398_cov_2.132308_g12924_i0 PRJNA1174207 13452 398 2.132308 8.48658584 root 1 Root_unresolved Root_unresolved 183 5.0399999999999994e-57   NR KAG7667380.1 1650286 g12924 i0 79.6 16.4170854271357 113 22 84.4 1 2 337 10 122 KAG7667380.1 hypothetical protein KSW81_001112 [Chlorella desiccata (nom. nud.)] diamond 6534 184 0.994565217391304 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
30420012 30420012 PRJNA1174207_P_NODE_20373_length_314_cov_1.132780_g19844_i0 PRJNA1174207 20373 314 1.13278 3.5569292 Tetradesmus obliquus 3088 Plants Plants 49.3 2.55e-4   NR WIA28476.1 3088 g19844 i0 47.7 0.85031847133758 44 23 42 0 297 166 2 45 WIA28476.1 hypothetical protein OEZ86_011020 [Tetradesmus obliquus] diamond 267 49.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
32095257 32095257 PRJNA1174207_P_NODE_42478_length_234_cov_2.074534_g41949_i0 PRJNA1174207 42478 234 2.074534 4.85440956 Chlamydomonas schloesseri 2026947 Plants Plants 71.6 2.14e-12   NR KAG2436163.1 2026947 g41949 i0 46.7 0.961538461538462 75 36 94.9 2 222 1 7 78 KAG2436163.1 hypothetical protein HYH02_011667 [Chlamydomonas schloesseri] diamond 225 71.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas schloesseri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;