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contig_metadata

21 rows where bioproject = "PRJNA1174207", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 21 ✖

tax_clade 1

  • Sar · 21 ✖

bioproject 1

  • PRJNA1174207 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1590567 1590567 PRJNA1174207_P_NODE_42282_length_235_cov_5.358025_g41753_i0 PRJNA1174207 42282 235 5.358025 12.59135875 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 429 8.33e-116   NTclustered gi|325195057|emb|FR825852.1| 890382 g41753 i0 99.574 102.191489361702 235 1 100 0 1 235 176 410 Albugo laibachii Nc14, genomic contig CONTIG_2891_NC14_v4_540_391 blastn 24015 429 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
4142682 4142682 PRJNA1174207_P_NODE_35304_length_249_cov_0.875000_g34775_i0 PRJNA1174207 35304 249 0.875 2.17875 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 142 1.56e-41   NR XP_024572655.1 4781 g34775 i0 86.6 40.5060240963855 82 11 98.8 0 2 247 47 128 XP_024572655.1 autophagy-related protein 8 precursor [Plasmopara halstedii] diamond 10086 143 0.993006993006993 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
9243757 9243757 PRJNA1174207_P_NODE_38468_length_245_cov_0.895349_g37939_i0 PRJNA1174207 38468 245 0.895349 2.19360505 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 436 5.229999999999999e-118   NTclustered gi|325194231|emb|FR825088.1| 890382 g37939 i0 98.776 2.16734693877551 245 3 100 0 1 245 1275 1519 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 531 436 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
9243856 9243856 PRJNA1174207_P_NODE_43288_length_226_cov_2.143791_g42759_i0 PRJNA1174207 43288 226 2.143791 4.84496766 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 257 3.97e-64   NTclustered gi|673036739|ref|XM_008874109.1| 157072 g42759 i0 88.942 0.920353982300885 208 23 92 0 1 208 339 546 Aphanomyces invadans hypothetical protein partial mRNA blastn 208 257 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
15618571 15618571 PRJNA1174207_P_NODE_37293_length_246_cov_0.890173_g36764_i0 PRJNA1174207 37293 246 0.890173 2.18982558 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 174 3.71e-49   NR RHY73488.1 112090 g36764 i0 93.8 2.96341463414634 81 5 98.8 0 245 3 452 532 RHY73488.1 hypothetical protein DYB38_004317 [Aphanomyces astaci] diamond 729 174 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
16892979 16892979 PRJNA1174207_P_NODE_41754_length_241_cov_0.916667_g41225_i0 PRJNA1174207 41754 241 0.916667 2.20916747 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 259 1.19e-64   NTclustered gi|673052656|ref|XM_008882067.1| 157072 g41225 i0 90 21.5477178423237 200 20 83 0 1 200 465 664 Aphanomyces invadans 40S ribosomal protein S15a mRNA blastn 5193 259 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
26723464 26723464 PRJNA1174207_P_NODE_17681_length_339_cov_1.375940_g17152_i0 PRJNA1174207 17681 339 1.37594 4.6644366 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 139 3.76e-39   NR KAJ0392104.1 114742 g17152 i0 60.4 9.78761061946903 111 44 98.2 0 335 3 49 159 KAJ0392104.1 hypothetical protein P43SY_009801 [Pythium insidiosum] diamond 3318 139 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
26819125 26819125 PRJNA1174207_P_NODE_13801_length_393_cov_1.443750_g13272_i0 PRJNA1174207 13801 393 1.44375 5.6739375 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.02   NR OQS01313.1 1202772 g13272 i0 32.6 0.702290076335878 92 50 61.1 3 358 119 303 394 OQS01313.1 ubiquitin carboxyl-terminal hydrolase [Achlya hypogyna] diamond 276 45.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
27008702 27008702 PRJNA1174207_P_NODE_27722_length_274_cov_1.532338_g27193_i0 PRJNA1174207 27722 274 1.532338 4.19860612 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 149 9.849999999999999e-43   NR GLD96418.1 114742 g27193 i0 73.6 0.996350364963504 91 24 99.6 0 273 1 30 120 GLD96418.1 hypothetical protein PINS_up005101 [Pythium insidiosum] diamond 273 149 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
28525019 28525019 PRJNA1174207_P_NODE_40547_length_242_cov_0.911243_g40018_i0 PRJNA1174207 40547 242 0.911243 2.20520806 Phytophthora palmivora 4796 SAR_Eukaryotes SAR_Eukaryotes 61.6 7.76e-9   NR POM71525.1 4796 g40018 i0 48.1 6.42148760330578 77 40 95.5 0 239 9 177 253 POM71525.1 Hypothetical protein PHPALM_11899 [Phytophthora palmivora] diamond 1554 61.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
29365082 29365082 PRJNA1174207_P_NODE_22089_length_303_cov_1.317391_g21560_i0 PRJNA1174207 22089 303 1.317391 3.99169473 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 158 4.029999999999999e-46   NR DAZ97987.1 4803 g21560 i0 73.7 13.8019801980198 99 26 98 0 3 299 4 102 DAZ97987.1 TPA: hypothetical protein N0F65_005145 [Lagenidium giganteum] diamond 4182 159 0.993710691823899 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
29554255 29554255 PRJNA1174207_P_NODE_31150_length_260_cov_1.358289_g30621_i0 PRJNA1174207 31150 260 1.358289 3.5315514 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 95.1 1.74e-20   NR KAJ0410185.1 114742 g30621 i0 71 3.01153846153846 62 18 71.5 0 186 1 11 72 KAJ0410185.1 hypothetical protein P43SY_002517 [Pythium insidiosum] diamond 783 95.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
29661088 29661088 PRJNA1174207_P_NODE_29370_length_267_cov_1.587629_g28841_i0 PRJNA1174207 29370 267 1.587629 4.23896943 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 48.5 4.62e-4   NR TMW58714.1 41045 g28841 i0 34.7 0.842696629213483 75 46 82 2 258 40 443 516 TMW58714.1 hypothetical protein Poli38472_010273 [Pythium oligandrum] diamond 225 48.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29724390 29724390 PRJNA1174207_P_NODE_36770_length_247_cov_0.885057_g36241_i0 PRJNA1174207 36770 247 0.885057 2.18609079 Phytophthora kernoviae 325452 SAR_Eukaryotes SAR_Eukaryotes 70.1 3.3e-12   NR RLN54651.1 325452 g36241 i0 51.4 4.36032388663968 72 34 86.2 1 2 214 104 175 RLN54651.1 hypothetical protein BBP00_00008848 [Phytophthora kernoviae] diamond 1077 70.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
30767248 30767248 PRJNA1174207_P_NODE_32094_length_256_cov_1.295082_g31565_i0 PRJNA1174207 32094 256 1.295082 3.31540992 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00656   NR KAF1335313.1 82926 g31565 i0 59.3 0.31640625 27 11 31.6 0 5 85 187 213 KAF1335313.1 Phosphatidylinositol-4-phosphate 5-kinase, partial [Globisporangium splendens] diamond 81 45.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
30988514 30988514 PRJNA1174207_P_NODE_16434_length_354_cov_1.206406_g15905_i0 PRJNA1174207 16434 354 1.206406 4.27067724 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 186 1.26e-56   NR GLD96418.1 114742 g15905 i0 72 3.99152542372881 118 33 100 0 1 354 37 154 GLD96418.1 hypothetical protein PINS_up005101 [Pythium insidiosum] diamond 1413 186 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
31020075 31020075 PRJNA1174207_P_NODE_33555_length_251_cov_0.865169_g33026_i0 PRJNA1174207 33555 251 0.865169 2.17157419 Phytophthora lilii 2077276 SAR_Eukaryotes SAR_Eukaryotes 139 5.22e-40   NR GMF65511.1 2077276 g33026 i0 84.3 4.94820717131474 83 13 99.2 0 251 3 64 146 GMF65511.1 unnamed protein product [Phytophthora lilii] diamond 1242 139 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora lilii
31114525 31114525 PRJNA1174207_P_NODE_20075_length_316_cov_2.958848_g19546_i0 PRJNA1174207 20075 316 2.958848 9.34995968 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 135 2.32e-38   NR XP_008867284.1 157072 g19546 i0 71.8 4.03481012658228 85 24 80.7 0 3 257 54 138 XP_008867284.1 60S ribosomal protein L37 [Aphanomyces invadans] diamond 1275 135 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
31387083 31387083 PRJNA1174207_P_NODE_8836_length_523_cov_2.413333_g8311_i0 PRJNA1174207 8836 523 2.413333 12.62173159 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 211 1.5e-66   NR UIZ28103.1 542832 g8311 i0 70.4 32.8451242829828 152 43 86.6 2 508 56 21 171 UIZ28103.1 hypothetical protein KXD40_004629 [Peronospora effusa] diamond 17178 213 0.990610328638498 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora effusa
32431006 32431006 PRJNA1174207_P_NODE_30819_length_261_cov_1.638298_g30290_i0 PRJNA1174207 30819 261 1.638298 4.27595778 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.013   NR DAZ92596.1 4803 g30290 i0 70.8 0.540229885057471 24 7 27.6 0 188 259 54 77 DAZ92596.1 TPA: hypothetical protein N0F65_003488 [Lagenidium giganteum] diamond 141 43.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
32557745 32557745 PRJNA1174207_P_NODE_20099_length_316_cov_1.880658_g19570_i0 PRJNA1174207 20099 316 1.880658 5.94287928 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62.8 3.3e-10   NR CCA27042.1 890382 g19570 i0 46.3 1.36708860759494 67 35 62.7 1 7 204 4 70 CCA27042.1 conserved hypothetical protein [Albugo laibachii Nc14] diamond 432 63.2 0.993670886075949 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;