contig_metadata
8 rows where bioproject = "PRJNA1174207", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5418497 | 5418497 | PRJNA1174207_P_NODE_16705_length_350_cov_2.747292_g16176_i0 | PRJNA1174207 | 16705 | 350 | 2.747292 | 9.615522 | Rhabdochlamydiaceae bacterium cvE99 | 1009364 | Bacteria | Bacteria | 584 | 2.639999999999999e-162 | NTclustered | gi|330375205|gb|JF513057.1| | 1009364 | g16176 | i0 | 97.923 | 103.757142857143 | 337 | 7 | 96 | 0 | 14 | 350 | 2 | 338 | Rhabdochlamydiaceae bacterium cvE99 16S ribosomal RNA gene, partial sequence | blastn | 36315 | 584 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium cvE99 | ||
| 9243194 | 9243194 | PRJNA1174207_P_NODE_10068_length_482_cov_2.114914_g9542_i0 | PRJNA1174207 | 10068 | 482 | 2.114914 | 10.19388548 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 532 | 1.38e-146 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g9542 | i0 | 86.68 | 102.265560165975 | 488 | 55 | 100 | 9 | 1 | 482 | 174843 | 175326 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 49292 | 532 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 10519350 | 10519350 | PRJNA1174207_P_NODE_33089_length_251_cov_3.140449_g32560_i0 | PRJNA1174207 | 33089 | 251 | 3.140449 | 7.88252699 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 342 | 1.21e-89 | NTclustered | gi|2874253676|emb|OY969110.1| | 305355 | g32560 | i0 | 91.235 | 120.03187250996 | 251 | 22 | 100 | 0 | 1 | 251 | 414073 | 414323 | MAG: uncultured Chlamydiae bacterium isolate MFD00082.bin.c.5 genome assembly, chromosome: 1 | blastn | 30128 | 342 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 15068217 | 15068217 | PRJNA1174207_P_NODE_22532_length_299_cov_2.044248_g22003_i0 | PRJNA1174207 | 22532 | 299 | 2.044248 | 6.11230152 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 370 | 6.76e-98 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g22003 | i0 | 90.942 | 80.0836120401338 | 276 | 24 | 92 | 1 | 1 | 275 | 1250324 | 1250599 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 23945 | 372 | 0.99462365591397806 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 15068351 | 15068351 | PRJNA1174207_P_NODE_31692_length_257_cov_2.739130_g31163_i0 | PRJNA1174207 | 31692 | 257 | 2.73913 | 7.0395641 | Bacteria | 2 | Bacteria | Bacteria | 364 | 2.6399999999999993e-96 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g31163 | i0 | 92.218 | 174.501945525292 | 257 | 20 | 100 | 0 | 1 | 257 | 175593 | 175849 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 44847 | 364 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 23268213 | 23268213 | PRJNA1174207_P_NODE_9379_length_503_cov_4.734884_g8853_i0 | PRJNA1174207 | 9379 | 503 | 4.734884 | 23.81646652 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 531 | 5.18e-146 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g8853 | i0 | 86.051 | 130.604373757455 | 509 | 53 | 99 | 18 | 2 | 499 | 2058547 | 2059048 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 65694 | 531 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 30261935 | 30261935 | PRJNA1174207_P_NODE_35332_length_249_cov_0.875000_g34803_i0 | PRJNA1174207 | 35332 | 249 | 0.875 | 2.17875 | Parachlamydia sp. | 2052048 | Bacteria | Bacteria | 84.3 | 9.04e-17 | NR | PJD96798.1 | 2052048 | g34803 | i0 | 51.2 | 1.01204819277108 | 84 | 37 | 98.8 | 2 | 2 | 247 | 544 | 625 | PJD96798.1 MAG: general secretion pathway protein GspD [Parachlamydia sp.] | diamond | 252 | 84.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia sp. | |
| 32177963 | 32177963 | PRJNA1174207_P_NODE_33598_length_251_cov_0.865169_g33069_i0 | PRJNA1174207 | 33598 | 251 | 0.865169 | 2.17157419 | Bacteria | 2 | Bacteria | Bacteria | 110 | 1.83e-27 | NR | HSX25597.1 | 2047757 | g33069 | i0 | 56.6 | 1.99601593625498 | 83 | 34 | 99.2 | 1 | 251 | 3 | 47 | 127 | HSX25597.1 hypothetical protein [Chlamydiales bacterium] | diamond | 501 | 110 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;