RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1174207", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA1174207 · 3 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27376114 27376114 PRJNA1174207_P_NODE_39623_length_243_cov_1.358824_g39094_i0 PRJNA1174207 39623 243 1.358824 3.30194232 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.3 0.0102   NR KAJ5078011.1 1746090 g39094 i0 29.9 1.77777777777778 77 53 93.8 1 2 229 10 86 KAJ5078011.1 arginine deiminase [Anaeramoeba ignava] diamond 432 44.3 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
28777347 28777347 PRJNA1174207_P_NODE_25107_length_285_cov_1.452830_g24578_i0 PRJNA1174207 25107 285 1.45283 4.1405655 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 62 1.58e-9   NR KAJ3446978.1 1746091 g24578 i0 38 0.831578947368421 79 48 82.1 1 8 241 7 85 KAJ3446978.1 hypothetical protein M0812_07781 [Anaeramoeba flamelloides] diamond 237 62 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
30577416 30577416 PRJNA1174207_P_NODE_41713_length_241_cov_0.916667_g41184_i0 PRJNA1174207 41713 241 0.916667 2.20916747 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 60.5 1.12e-8   NR KAJ5074485.1 1746090 g41184 i0 36.2 0.858921161825726 69 40 85.9 2 9 215 112 176 KAJ5074485.1 hypothetical protein M0811_01116 [Anaeramoeba ignava] diamond 207 60.5 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;