RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1174207", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA1174207 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27325040 27325040 PRJNA1174207_P_NODE_26743_length_278_cov_1.878049_g26214_i0 PRJNA1174207 26743 278 1.878049 5.22097622 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 131 1.5299999999999999e-34   NR MCC7531629.1 2052166 g26214 i0 86.9 0.906474820143885 84 11 90.6 0 253 2 1 84 MCC7531629.1 AI-2E family transporter [Candidatus Melainabacteria bacterium] diamond 252 131 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
29345866 29345866 PRJNA1174207_P_NODE_42249_length_236_cov_2.441718_g41720_i0 PRJNA1174207 42249 236 2.441718 5.76245448 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 154 7.15e-45   NR MCC7532266.1 2052166 g41720 i0 98.7 0.991525423728814 78 1 99.2 0 3 236 92 169 MCC7532266.1 type III pantothenate kinase [Candidatus Melainabacteria bacterium] diamond 234 154 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
30767244 30767244 PRJNA1174207_P_NODE_25414_length_284_cov_1.355450_g24885_i0 PRJNA1174207 25414 284 1.35545 3.849478 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 160 9.74e-45   NR MBX9938750.1 2364082 g24885 i0 85.1 2.97887323943662 94 14 99.3 0 1 282 30 123 MBX9938750.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 846 160 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;