RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1169999" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1169999 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28808692 28808692 PRJNA1169999_P_NODE_1108_length_348_cov_0.778182_g1072_i0 PRJNA1169999 1108 348 0.778182 2.70807336 Methanobrevibacter sp. 66852 Archaea Archaea 55.1 3.21e-7   NR MBO7733515.1 66852 g1072 i0 73.5 0.293103448275862 34 9 29.3 0 251 150 1 34 MBO7733515.1 hypothetical protein [Methanobrevibacter sp.] diamond 102 55.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29282436 29282436 PRJNA1169999_P_NODE_4109_length_242_cov_0.911243_g4073_i0 PRJNA1169999 4109 242 0.911243 2.20520806 Methanobrevibacter sp. 66852 Archaea Archaea 98.6 7.13e-24   NR MBO7732326.1 66852 g4073 i0 75.4 0.756198347107438 61 14 74.4 1 241 62 48 108 MBO7732326.1 DUF4216 domain-containing protein [Methanobrevibacter sp.] diamond 183 98.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30388488 30388488 PRJNA1169999_P_NODE_3833_length_244_cov_0.900585_g3797_i0 PRJNA1169999 3833 244 0.900585 2.1974274 Methanobrevibacter sp. 66852 Archaea Archaea 72 1.57e-12   NR MBO7732325.1 66852 g3797 i0 68.6 0.627049180327869 51 16 62.7 0 53 205 1 51 MBO7732325.1 DUF4218 domain-containing protein [Methanobrevibacter sp.] diamond 153 72 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31715629 31715629 PRJNA1169999_P_NODE_737_length_423_cov_1.362857_g701_i0 PRJNA1169999 737 423 1.362857 5.76488511 Methanobrevibacter sp. 66852 Archaea Archaea 142 4.119999999999999e-40   NR MBO7732326.1 66852 g701 i0 86.8 0.539007092198582 76 10 53.9 0 422 195 24 99 MBO7732326.1 DUF4216 domain-containing protein [Methanobrevibacter sp.] diamond 228 142 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31747160 31747160 PRJNA1169999_P_NODE_3437_length_246_cov_0.890173_g3401_i0 PRJNA1169999 3437 246 0.890173 2.18982558 Methanobrevibacter sp. 66852 Archaea Archaea 117 3.69e-29   NR MBO7732325.1 66852 g3401 i0 65.6 1.13414634146341 93 19 97.6 1 4 243 151 243 MBO7732325.1 DUF4218 domain-containing protein [Methanobrevibacter sp.] diamond 279 117 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;