RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1169999", tax_kingdom = "Fungi" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1169999 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7968535 7968535 PRJNA1169999_P_NODE_3867_length_243_cov_1.417647_g3831_i0 PRJNA1169999 3867 243 1.417647 3.44488221 Auricularia cornea 1238391 Fungi Fungi 399 6.789999999999999e-107   NTclustered gi|1700042020|gb|MN156315.1| 1238391 g3831 i0 97.059 99.5020576131687 238 6 98 1 1 237 3869 4106 Auricularia cornea isolate B02 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA and 5S ribosomal RNA genes, complete sequence blastn 24179 399 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Auriculariales Auriculariaceae Auricularia Auricularia cornea
26838417 26838417 PRJNA1169999_P_NODE_2201_length_269_cov_0.801020_g2165_i0 PRJNA1169999 2201 269 0.80102 2.1547438 Opisthokonta 33154 Fungi Fungi 101 1.3800000000000001e-22   NR KAK4335605.1 5286 g2165 i0 72.3 143.453531598513 83 23 92.6 0 21 269 6 88 KAK4335605.1 putative histone H3 (putative) [Rhodotorula toruloides] diamond 38589 101 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula toruloides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;