RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1169999" and tax_kingdom = "Fungi"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1169999 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2866050 2866050 PRJNA1169999_P_NODE_1403_length_308_cov_1.493617_g1367_i0 PRJNA1169999 1403 308 1.493617 4.60034036 Trichoderma atroviride 63577 Fungi Fungi 86.1 2.83e-12   NTclustered gi|2749703766|ref|XM_014090103.2| 63577 g1367 i0 88 1.43181818181818 75 6 24 1 26 100 2269 2198 Trichoderma atroviride uncharacterized protein (TrAtP1_012533), partial mRNA blastn 441 86.1 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma atroviride
4868317 4868317 PRJNA1169999_P_NODE_3484_length_246_cov_0.890173_g3448_i0 PRJNA1169999 3484 246 0.890173 2.18982558 Trichoderma 5543 Fungi Fungi 189 1.62e-43   NTclustered gi|2670750865|ref|XM_062899072.1| 173218 g3448 i0 99.048 1.70731707317073 105 1 43 0 1 105 105 1 Trichoderma aggressivum f. europaeum uncharacterized protein (Triagg1_4646), partial mRNA blastn 420 189 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma aggressivum
6143107 6143107 PRJNA1169999_P_NODE_1445_length_304_cov_1.930736_g1409_i0 PRJNA1169999 1445 304 1.930736 5.86943744 Lithohypha 2695291 Fungi Fungi 512 1.08e-140   NTclustered gi|2317219310|emb|OX346377.1| 1690604 g1409 i0 99.643 98.4473684210526 280 1 92 0 1 280 280 1 Lithohypha guttulata genomic DNA sequence contains 28S rRNA gene, strain FMR_20100 blastn 29928 514 0.996108949416342 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Lithohypha Lithohypha guttulata
7968535 7968535 PRJNA1169999_P_NODE_3867_length_243_cov_1.417647_g3831_i0 PRJNA1169999 3867 243 1.417647 3.44488221 Auricularia cornea 1238391 Fungi Fungi 399 6.789999999999999e-107   NTclustered gi|1700042020|gb|MN156315.1| 1238391 g3831 i0 97.059 99.5020576131687 238 6 98 1 1 237 3869 4106 Auricularia cornea isolate B02 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA and 5S ribosomal RNA genes, complete sequence blastn 24179 399 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Auriculariales Auriculariaceae Auricularia Auricularia cornea
12518948 12518948 PRJNA1169999_P_NODE_3650_length_245_cov_0.895349_g3614_i0 PRJNA1169999 3650 245 0.895349 2.19360505 Ascomycota 4890 Fungi Fungi 368 1.93e-97   NTclustered gi|1002923432|gb|KU561803.1| 29908 g3614 i0 94.215 104.187755102041 242 13 98 1 2 242 243 2 Sporothrix schenckii strain B3759 28S ribosomal RNA gene, partial sequence blastn 25526 368 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Ophiostomatales Ophiostomataceae Sporothrix Sporothrix schenckii
26838417 26838417 PRJNA1169999_P_NODE_2201_length_269_cov_0.801020_g2165_i0 PRJNA1169999 2201 269 0.80102 2.1547438 Opisthokonta 33154 Fungi Fungi 101 1.3800000000000001e-22   NR KAK4335605.1 5286 g2165 i0 72.3 143.453531598513 83 23 92.6 0 21 269 6 88 KAK4335605.1 putative histone H3 (putative) [Rhodotorula toruloides] diamond 38589 101 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula toruloides
30735563 30735563 PRJNA1169999_P_NODE_3934_length_243_cov_0.905882_g3898_i0 PRJNA1169999 3934 243 0.905882 2.20129326 Lunasporangiospora selenospora 979761 Fungi Fungi 45.1 0.00537   NR KAF9579875.1 979761 g3898 i0 64 1.2962962962963 25 9 30.9 0 89 15 241 265 KAF9579875.1 hypothetical protein BGW38_003691 [Lunasporangiospora selenospora] diamond 315 45.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lunasporangiospora Lunasporangiospora selenospora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;