RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA1168532" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1168532 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
315186 315186 PRJNA1168532_S_NODE_109681_length_307_cov_1.431818_g106738_i0 PRJNA1168532 109681 307 1.431818 4.39568126 Malassezia restricta 76775 Fungi Fungi 568 2.3e-157   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g106738 i0 100 103.657980456026 307 0 100 0 1 307 1499 1805 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 31823 568 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
1589878 1589878 PRJNA1168532_S_NODE_360382_length_150_cov_1.355140_g357439_i0 PRJNA1168532 360382 150 1.35514 2.03271 Malassezia restricta 76775 Fungi Fungi 278 1.85e-70   NTclustered gi|1546632534|ref|XM_027627927.1| 76775 g357439 i0 100 1 150 0 100 0 1 150 614 763 Malassezia restricta cysteine-rich secretory protein (MRET_1300), partial mRNA blastn 150 278 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15617958 15617958 PRJNA1168532_S_NODE_252473_length_189_cov_1.431507_g249530_i0 PRJNA1168532 252473 189 1.431507 2.70554823 Malassezia restricta 76775 Fungi Fungi 350 5.14e-92   NTclustered gi|1546630879|ref|XM_027627100.1| 76775 g249530 i0 100 1 189 0 100 0 1 189 1195 1383 Malassezia restricta uncharacterized protein (MRET_0473), partial mRNA blastn 189 350 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17618027 17618027 PRJNA1168532_S_NODE_192634_length_224_cov_1.944751_g189691_i0 PRJNA1168532 192634 224 1.944751 4.35624224 Malassezia 55193 Fungi Fungi 409 1.03e-109   NTclustered gi|915512619|gb|KP825402.1| 76775 g189691 i0 99.554 99.3839285714286 224 1 100 0 1 224 248 25 Malassezia restricta strain ISOSEB46F 28S ribosomal RNA gene, partial sequence blastn 22262 409 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
18166805 18166805 PRJNA1168532_S_NODE_321195_length_161_cov_1.855932_g318252_i0 PRJNA1168532 321195 161 1.855932 2.98805052 Malassezia restricta 76775 Fungi Fungi 152 1.28e-32   NTclustered gi|1546632090|ref|XM_027627705.1| 76775 g318252 i0 98.824 0.788819875776398 85 1 79 0 77 161 514 430 Malassezia restricta uncharacterized protein (MRET_1078), partial mRNA blastn 127 152 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
19441147 19441147 PRJNA1168532_S_NODE_261156_length_185_cov_0.992958_g258213_i0 PRJNA1168532 261156 185 0.992958 1.8369723 Malassezia restricta 76775 Fungi Fungi 331 1.81e-86   NTclustered gi|1546638177|ref|XM_027630730.1| 76775 g258213 i0 98.919 1 185 2 100 0 1 185 5388 5572 Malassezia restricta HEAT repeat protein (MRET_4103), partial mRNA blastn 185 331 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
20166594 20166594 PRJNA1168532_S_NODE_44116_length_445_cov_2.495025_g41296_i0 PRJNA1168532 44116 445 2.495025 11.10286125 Malassezia 55193 Fungi Fungi 811 0   NTclustered gi|1321659621|gb|KY911094.1| 76775 g41296 i0 100 89.876404494382 439 0 99 0 1 439 32625 33063 Malassezia restricta mitochondrion, complete genome blastn 39995 811 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
20716541 20716541 PRJNA1168532_S_NODE_291417_length_172_cov_1.217054_g288474_i0 PRJNA1168532 291417 172 1.217054 2.09333288 Malassezia restricta 76775 Fungi Fungi 296 6.04e-76   NTclustered gi|1546630031|ref|XM_027626676.1| 76775 g288474 i0 98.225 0.982558139534884 169 3 98 0 1 169 231 399 Malassezia restricta ESCRT-II complex subunit VPS22 (MRET_0049), partial mRNA blastn 169 296 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
21991812 21991812 PRJNA1168532_S_NODE_302378_length_168_cov_1.128000_g299435_i0 PRJNA1168532 302378 168 1.128 1.89504 Malassezia restricta 76775 Fungi Fungi 241 2.81e-59   NTclustered gi|1546638161|ref|XM_027630722.1| 76775 g299435 i0 100 1.02380952380952 130 0 77 0 1 130 150 279 Malassezia restricta uncharacterized protein (MRET_4095), partial mRNA blastn 172 241 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;