contig_metadata
10 rows where bioproject = "PRJNA1168532" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1040232 | 1040232 | PRJNA1168532_S_NODE_226421_length_203_cov_1.762500_g223478_i0 | PRJNA1168532 | 226421 | 203 | 1.7625 | 3.577875 | root | 1 | Root_unresolved | Root_unresolved | 375 | 9.24e-100 | NTclustered | gi|2497259144|gb|OQ874907.1| | 1306 | g223478 | i0 | 100 | 100 | 203 | 0 | 100 | 0 | 1 | 203 | 498 | 296 | Streptococcus sp. strain QT-53 16S ribosomal RNA gene, partial sequence | blastn | 20300 | 375 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. | ||
| 5418264 | 5418264 | PRJNA1168532_S_NODE_295985_length_170_cov_1.645669_g293042_i0 | PRJNA1168532 | 295985 | 170 | 1.645669 | 2.7976373 | Staphylococcus auricularis | 29379 | Bacteria | Bacteria | 315 | 1.64e-81 | NTclustered | gi|1403688813|emb|LS483491.1| | 29379 | g293042 | i0 | 100 | 495.6 | 170 | 0 | 100 | 0 | 1 | 170 | 1486561 | 1486730 | Staphylococcus auricularis strain NCTC12101 genome assembly, chromosome: 1 | blastn | 84252 | 315 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus auricularis | ||
| 5418288 | 5418288 | PRJNA1168532_S_NODE_9285_length_801_cov_2.121372_g7745_i0 | PRJNA1168532 | 9285 | 801 | 2.121372 | 16.99218972 | Fructilactobacillus sanfranciscensis | 1625 | Bacteria | Bacteria | 143 | 2.87e-39 | NR | POH17992.1 | 1625 | g7745 | i0 | 60.3 | 0.49063670411985 | 131 | 52 | 49.1 | 0 | 102 | 494 | 1 | 131 | POH17992.1 hypothetical protein BGL45_06810 [Fructilactobacillus sanfranciscensis] | diamond | 393 | 143 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Fructilactobacillus | Fructilactobacillus sanfranciscensis | ||
| 6143095 | 6143095 | PRJNA1168532_S_NODE_221685_length_206_cov_1.159509_g218742_i0 | PRJNA1168532 | 221685 | 206 | 1.159509 | 2.38858854 | root | 1 | Root_unresolved | Root_unresolved | 241 | 3.5800000000000007e-59 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g218742 | i0 | 100 | 69.8155339805825 | 130 | 0 | 100 | 0 | 1 | 130 | 1185 | 1314 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 14382 | 241 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 7418092 | 7418092 | PRJNA1168532_S_NODE_242326_length_194_cov_2.337748_g239383_i0 | PRJNA1168532 | 242326 | 194 | 2.337748 | 4.53523112 | Streptococcus | 1301 | Bacteria | Bacteria | 353 | 4.1e-93 | NTclustered | gi|1943211519|gb|CP065707.1| | 1303 | g239383 | i0 | 99.485 | 428.329896907216 | 194 | 1 | 100 | 0 | 1 | 194 | 424105 | 424298 | Streptococcus oralis strain FDAARGOS_885 chromosome, complete genome | blastn | 83096 | 353 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 8693201 | 8693201 | PRJNA1168532_S_NODE_288207_length_173_cov_1.446154_g285264_i0 | PRJNA1168532 | 288207 | 173 | 1.446154 | 2.50184642 | root | 1 | Root_unresolved | Root_unresolved | 309 | 7.81e-80 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g285264 | i0 | 98.844 | 97.9479768786127 | 173 | 2 | 100 | 0 | 1 | 173 | 259 | 87 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 16945 | 309 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 11243535 | 11243535 | PRJNA1168532_S_NODE_250889_length_190_cov_1.102041_g247946_i0 | PRJNA1168532 | 250889 | 190 | 1.102041 | 2.0938779 | Staphylococcus | 1279 | Bacteria | Bacteria | 351 | 1.4399999999999997e-92 | NTclustered | gi|1848617844|gb|CP053957.1| | 29388 | g247946 | i0 | 100 | 84.2473684210526 | 190 | 0 | 100 | 0 | 1 | 190 | 2002019 | 2001830 | Staphylococcus capitis strain FDAARGOS_753 chromosome, complete genome | blastn | 16007 | 351 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus capitis | ||
| 16342763 | 16342763 | PRJNA1168532_S_NODE_55373_length_409_cov_1.568306_g52501_i0 | PRJNA1168532 | 55373 | 409 | 1.568306 | 6.41437154 | Bacillati | 1783272 | Bacteria | Bacteria | 715 | 0 | NTclustered | gi|9623518|gb|AF269622.1|AF269622 | 1282 | g52501 | i0 | 98.997 | 505.672371638142 | 399 | 4 | 98 | 0 | 11 | 409 | 3766 | 3368 | Staphylococcus epidermidis strain SR1 clone step.1014c03 genomic sequence | blastn | 206820 | 715 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 20166591 | 20166591 | PRJNA1168532_S_NODE_226536_length_203_cov_1.625000_g223593_i0 | PRJNA1168532 | 226536 | 203 | 1.625 | 3.29875 | Staphylococcus | 1279 | Bacteria | Bacteria | 375 | 9.24e-100 | NTclustered | gi|2071692135|gb|CP073824.1| | 1282 | g223593 | i0 | 100 | 545.768472906404 | 203 | 0 | 100 | 0 | 1 | 203 | 699770 | 699972 | Staphylococcus epidermidis strain B1200599 chromosome, complete genome | blastn | 110791 | 375 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 28146170 | 28146170 | PRJNA1168532_S_NODE_232565_length_200_cov_0.885350_g229622_i0 | PRJNA1168532 | 232565 | 200 | 0.88535 | 1.7707 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 54.7 | 1.26e-6 | NR | QHG80002.1 | 1280 | g229622 | i0 | 50 | 1.02 | 68 | 28 | 99 | 3 | 198 | 1 | 297 | 360 | QHG80002.1 hypothetical protein D7B62_12520 [Staphylococcus aureus] | diamond | 204 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;