RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1168532" and tax_phylum = "Arthropoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1168532 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6693086 6693086 PRJNA1168532_S_NODE_280406_length_176_cov_1.609023_g277463_i0 PRJNA1168532 280406 176 1.609023 2.83188048 Drosophila montana 40370 Arthropoda Arthropoda 54.7 0.004   NTclustered gi|2721904602|ref|XM_064682810.1| 40370 g277463 i0 100 0.164772727272727 29 0 16 0 118 146 533 561 PREDICTED: Drosophila montana uncharacterized LOC135428716 (LOC135428716), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Drosophilidae Drosophila Drosophila montana
9243114 9243114 PRJNA1168532_S_NODE_325708_length_160_cov_1.205128_g322765_i0 PRJNA1168532 325708 160 1.205128 1.9282048 Allonemobius socius 208665 Arthropoda Arthropoda 274 2.5999999999999997e-69   NTclustered gi|27463887|gb|AF514463.1| 208665 g322765 i0 98.71 96.73125 155 1 96 1 1 154 167 13 Allonemobius socius 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 15477 274 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Orthoptera Trigonidiidae Allonemobius Allonemobius socius
10518816 10518816 PRJNA1168532_S_NODE_251829_length_189_cov_2.006849_g248886_i0 PRJNA1168532 251829 189 2.006849 3.79294461 Linepithema humile 83485 Arthropoda Arthropoda 54.7 0.005   NTclustered gi|2788974236|ref|XM_067355306.1| 83485 g248886 i0 100 0.153439153439153 29 0 15 0 12 40 5164 5192 PREDICTED: Linepithema humile muscleblind (mbl), transcript variant X21, mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Formicidae Linepithema Linepithema humile
26755401 26755401 PRJNA1168532_S_NODE_362781_length_150_cov_0.878505_g359838_i0 PRJNA1168532 362781 150 0.878505 1.3177575 Hyalomma asiaticum 266040 Arthropoda Arthropoda 40.8 0.0424   NR KAH6944189.1 266040 g359838 i0 40 0.8 40 24 80 0 136 17 110 149 KAH6944189.1 hypothetical protein HPB50_002256 [Hyalomma asiaticum] diamond 120 40.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Ixodida Ixodidae Hyalomma Hyalomma asiaticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;