RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1167252" and tax_phylum = "Candidatus Uhriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Uhriibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1167252 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2865356 2865356 PRJNA1167252_P_NODE_23323_length_252_cov_0.871508_g23050_i0 PRJNA1167252 23323 252 0.871508 2.19620016 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 95.3 3.74e-15   NTclustered gi|2874254032|emb|OY970357.1| 2053634 g23050 i0 98.182 3.8015873015873 55 0 22 1 197 251 615844 615897 MAG: Candidatus Uhrbacteria bacterium isolate MFD02416.bin.c.4 genome assembly, chromosome: 1 blastn 958 95.3 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;