RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1167252" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1167252 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21441916 21441916 PRJNA1167252_P_NODE_25997_length_248_cov_0.891429_g25724_i0 PRJNA1167252 25997 248 0.891429 2.21074392 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 73.6 5.47e-13   NR NUN97091.1 2035772 g25724 i0 100 0.387096774193548 32 0 38.7 0 248 153 530 561 NUN97091.1 peptidoglycan DD-metalloendopeptidase family protein [Candidatus Omnitrophota bacterium] diamond 96 73.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26628910 26628910 PRJNA1167252_P_NODE_25401_length_249_cov_0.886364_g25128_i0 PRJNA1167252 25401 249 0.886364 2.20704636 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 133 9.24e-35   NR MCK5014024.1 2035772 g25128 i0 85.2 0.975903614457831 81 12 97.6 0 249 7 297 377 MCK5014024.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 243 133 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28682895 28682895 PRJNA1167252_P_NODE_26387_length_247_cov_0.896552_g26114_i0 PRJNA1167252 26387 247 0.896552 2.21448344 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 138 9.96e-41   NR NPU98234.1 2035772 g26114 i0 98.5 0.813765182186235 67 1 81.4 0 2 202 19 85 NPU98234.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 201 138 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30261913 30261913 PRJNA1167252_P_NODE_28072_length_244_cov_0.912281_g27799_i0 PRJNA1167252 28072 244 0.912281 2.22596564 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 154 1.01e-44   NR MCM8813562.1 2035772 g27799 i0 96.3 0.983606557377049 80 3 98.4 0 242 3 4 83 MCM8813562.1 YebC/PmpR family DNA-binding transcriptional regulator [Candidatus Omnitrophota bacterium] diamond 240 154 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;