RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1167252" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1167252 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11793141 11793141 PRJNA1167252_P_NODE_22670_length_253_cov_0.866667_g22397_i0 PRJNA1167252 22670 253 0.866667 2.19266751 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 153 8.58e-43   NR HXG19862.1 2072417 g22397 i0 94 1.96837944664032 83 5 98.4 0 3 251 298 380 HXG19862.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Candidatus Methylomirabilota bacterium] diamond 498 153 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
16891729 16891729 PRJNA1167252_P_NODE_27054_length_246_cov_0.901734_g26781_i0 PRJNA1167252 27054 246 0.901734 2.21826564 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 118 2.86e-30   NR HET9925121.1 2072417 g26781 i0 90.3 3.02439024390244 62 6 75.6 0 1 186 249 310 HET9925121.1 fumarylacetoacetate hydrolase family protein [Candidatus Methylomirabilota bacterium] diamond 744 118 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;