RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1167252", tax_kingdom = "Orthornavirae" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 1 ✖

tax_kingdom 1

  • Orthornavirae · 1 ✖

bioproject 1

  • PRJNA1167252 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18166022 18166022 PRJNA1167252_P_NODE_18615_length_283_cov_1.057143_g18342_i0 PRJNA1167252 18615 283 1.057143 2.99171469 Ripagrog virus 3130723 Viruses Viruses 281 3.06e-71   NTclustered gi|2717320584|gb|PP173025.1| 3130723 g18342 i0 89.286 184.017667844523 224 24 79 0 4 227 1939 1716 MAG: Ripagrog virus isolate KCAP2_k141_407948 genomic sequence blastn 52077 281 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripagrog virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;