RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1167252", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1167252 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26755390 26755390 PRJNA1167252_P_NODE_28861_length_243_cov_0.917647_g28588_i0 PRJNA1167252 28861 243 0.917647 2.22988221 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 72.8 9.4e-13   NR HVQ44403.1 2890869 g28588 i0 47.5 0.987654320987654 80 37 97.5 2 241 5 51 126 HVQ44403.1 hypothetical protein [Candidatus Saccharimonadia bacterium] diamond 240 72.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
31241029 31241029 PRJNA1167252_P_NODE_27435_length_245_cov_0.906977_g27162_i0 PRJNA1167252 27435 245 0.906977 2.22209365 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 120 9.49e-32   NR HEX5455766.1 2973664 g27162 i0 81.3 0.918367346938776 75 14 91.8 0 244 20 176 250 HEX5455766.1 sulfite exporter TauE/SafE family protein [Candidatus Saccharimonadales bacterium] diamond 225 120 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
32727348 32727348 PRJNA1167252_P_NODE_26460_length_247_cov_0.896552_g26187_i0 PRJNA1167252 26460 247 0.896552 2.21448344 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 152 6.4699999999999985e-43   NR MBQ8996674.1 2026720 g26187 i0 87.8 2.98785425101215 82 10 99.6 0 2 247 162 243 MBQ8996674.1 phospho-N-acetylmuramoyl-pentapeptide-transferase [Candidatus Saccharibacteria bacterium] diamond 738 152 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;