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contig_metadata

35 rows where bioproject = "PRJNA1166865" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 35 ✖

tax_clade 1

bioproject 1

  • PRJNA1166865 · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3590023 3590023 PRJNA1166865_P_NODE_12643_length_600_cov_37.620493_g12409_i0 PRJNA1166865 12643 600 37.620493 225.722958 root 1 Root_unresolved Root_unresolved 1090 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g12409 i0 100 98.8483333333333 590 0 98 0 1 590 2311 1722 Unidentified adenovirus strain CHOP Ad5 blastn 59309 1090 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
3590109 3590109 PRJNA1166865_P_NODE_663_length_1761_cov_47.666469_g622_i0 PRJNA1166865 663 1761 47.666469 839.40651909 root 1 Root_unresolved Root_unresolved 3234 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g622 i0 99.83 99.9789892106757 1761 2 100 1 1 1761 4065 2306 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 176063 3253 0.994159237626806 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
5416656 5416656 PRJNA1166865_P_NODE_70565_length_261_cov_1.601064_g70324_i0 PRJNA1166865 70565 261 1.601064 4.17877704 Potyvirus sacchari 3240610 Viruses Viruses 52.8 0.024   NTclustered gi|1766756986|gb|MK684196.1| 12224 g70324 i0 100 0.10727969348659 28 0 11 0 209 236 622 595 Sugarcane mosaic virus isolate RwS17_002 polyprotein gene, partial cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sacchari
6142406 6142406 PRJNA1166865_P_NODE_2085_length_1263_cov_6.807563_g1991_i0 PRJNA1166865 2085 1263 6.807563 85.97952069 Orthorubulavirus 2560195 Viruses Viruses 2314 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1991 i0 99.762 84.507521773555 1263 1 100 1 1 1263 1776 3036 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 106733 2327 0.994413407821229 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
6142515 6142515 PRJNA1166865_P_NODE_805_length_1677_cov_51.791147_g622_i1 PRJNA1166865 805 1677 51.791147 868.53753519 root 1 Root_unresolved Root_unresolved 2217 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g622 i1 99.917 99.933214072749 1203 1 100 0 475 1677 3508 2306 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 167588 2222 0.997749774977498 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
7417542 7417542 PRJNA1166865_P_NODE_886_length_1631_cov_6.725289_g829_i0 PRJNA1166865 886 1631 6.725289 109.68946359 Orthorubulavirus 2560195 Viruses Viruses 2979 0   NTclustered gi|146351838|gb|EF543648.1| 149595 g829 i0 99.632 76.4794604537094 1631 6 100 0 1 1631 2 1632 Canine parainfluenza virus strain FA nucleocapsid (N) gene, complete cds blastn 124738 2985 0.997989949748744 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
9241527 9241527 PRJNA1166865_P_NODE_70808_length_260_cov_2.379679_g70567_i0 PRJNA1166865 70808 260 2.379679 6.1871654 Simplexvirus humanalpha1 3050292 Viruses Viruses 54.7 0.007   NTclustered gi|1407524148|gb|MG999872.1| 10298 g70567 i0 100 0.111538461538462 29 0 11 0 93 121 130495 130523 Human alphaherpesvirus 1 strain 2003-15756, partial genome blastn 29 54.7 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1
11242846 11242846 PRJNA1166865_P_NODE_2729_length_1148_cov_5.747907_g2618_i0 PRJNA1166865 2729 1148 5.747907 65.98597236 Paramyxoviridae 11158 Viruses Viruses 2104 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g2618 i0 99.739 68.9477351916376 1148 3 100 0 1 1148 2057 3204 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 79152 2115 0.994799054373522 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
15067253 15067253 PRJNA1166865_P_NODE_39472_length_347_cov_0.843066_g39231_i0 PRJNA1166865 39472 347 0.843066 2.92543902 Solumvirus sp. 2487773 Viruses Viruses 151 2.27e-43   NR AYV86227.1 2487773 g39231 i0 65.5 1.0028818443804 116 39 99.4 1 346 2 50 165 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 348 151 1 Viruses Pithoviruses             Solumvirus sp.
18165039 18165039 PRJNA1166865_P_NODE_63595_length_277_cov_2.142157_g63354_i0 PRJNA1166865 63595 277 2.142157 5.93377489 Burkholderia phage BCSR5 2805747 Viruses Viruses 67.6 9.1e-7   NTclustered gi|1971775256|gb|MW460245.1| 2805747 g63354 i0 100 0.545126353790614 36 0 13 0 103 138 619 654 Burkholderia phage BCSR5, complete genome blastn 151 67.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Burkholderia phage BCSR5
21441593 21441593 PRJNA1166865_P_NODE_737_length_1714_cov_4.862279_g690_i0 PRJNA1166865 737 1714 4.862279 83.33946206 Orthorubulavirus 2560195 Viruses Viruses 3155 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g690 i0 99.883 97.0933488914819 1714 2 100 0 1 1714 6203 4490 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 166418 3155 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
24539282 24539282 PRJNA1166865_P_NODE_60520_length_284_cov_1.924171_g60279_i0 PRJNA1166865 60520 284 1.924171 5.46464564 Sinorhizobium phage StopSmel 2981545 Viruses Viruses 54.7 0.007   NTclustered gi|2622989299|gb|OR786374.1| 2981545 g60279 i0 96.875 0.112676056338028 32 1 11 0 201 232 26669 26700 Sinorhizobium phage StopSmel, complete genome blastn 32 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Sinorhizobium phage StopSmel
26692202 26692202 PRJNA1166865_P_NODE_93441_length_242_cov_0.911243_g93200_i0 PRJNA1166865 93441 242 0.911243 2.20520806 uncultured virus 340016 Viruses Viruses 79 1.15e-15   NR CAH6419623.1 340016 g93200 i0 51.3 0.991735537190083 80 31 99.2 1 2 241 51 122 CAH6419623.1 Hypothetical protein HVR_LOCUS694 [uncultured virus] diamond 240 79 1 Viruses               uncultured virus
26945416 26945416 PRJNA1166865_P_NODE_61582_length_282_cov_1.392344_g61341_i0 PRJNA1166865 61582 282 1.392344 3.92641008 African cichlid piscichuvirus 3065075 Viruses Viruses 82 9.73e-16   NR WLN26256.1 3065075 g61341 i0 45.3 1.01063829787234 95 50 98.9 1 279 1 117 211 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 285 82 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
27325005 27325005 PRJNA1166865_P_NODE_63743_length_277_cov_1.509804_g63502_i0 PRJNA1166865 63743 277 1.509804 4.18215708 Solumvirus sp. 2487773 Viruses Viruses 129 5.23e-35   NR AYV86227.1 2487773 g63502 i0 65.9 0.985559566787004 91 31 98.6 0 273 1 56 146 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 273 129 1 Viruses Pithoviruses             Solumvirus sp.
27672503 27672503 PRJNA1166865_P_NODE_86644_length_245_cov_0.895349_g86403_i0 PRJNA1166865 86644 245 0.895349 2.19360505 Siphoviridae sp. ctBtS1 2832643 Viruses Viruses 56.6 3.88e-7   NR DAE22056.1 2826190 g86403 i0 45.2 1.62857142857143 62 27 67.3 1 168 4 58 119 DAE22056.1 MAG TPA: Xylosidase [Siphoviridae sp. ctBtS10] diamond 399 56.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Siphoviridae sp. ctBtS10
27767286 27767286 PRJNA1166865_P_NODE_89004_length_244_cov_0.900585_g88763_i0 PRJNA1166865 89004 244 0.900585 2.1974274 Yasminevirus sp. GU-2 3060817 Viruses Viruses 50.1 2.6e-5   NR VBB18571.1 2420051 g88763 i0 41.1 0.688524590163934 56 33 68.9 0 2 169 80 135 VBB18571.1 vesicle-associated membrane [Yasminevirus sp. GU-2018] diamond 168 50.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Yasminevirus Yasminevirus saudimassiliense
27798796 27798796 PRJNA1166865_P_NODE_73464_length_254_cov_1.701657_g73223_i0 PRJNA1166865 73464 254 1.701657 4.32220878 Sylvanvirus sp. 2487774 Viruses Viruses 102 9.83e-26   NR AYV86982.1 2487774 g73223 i0 70.6 0.803149606299213 68 20 80.3 0 253 50 69 136 AYV86982.1 MAG: nucleic acid-binding protein [Sylvanvirus sp.] diamond 204 102 1 Viruses               Sylvanvirus sp.
27861649 27861649 PRJNA1166865_P_NODE_89045_length_244_cov_0.900585_g88804_i0 PRJNA1166865 89045 244 0.900585 2.1974274 Caudoviricetes sp. 2832643 Viruses Viruses 127 3.22e-36   NR XOR38063.1 2832643 g88804 i0 73.8 0.983606557377049 80 21 98.4 0 240 1 18 97 XOR38063.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 240 127 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28007468 28007468 PRJNA1166865_P_NODE_13645_length_579_cov_1.521739_g13409_i0 PRJNA1166865 13645 579 1.521739 8.81086881 root 1 Root_unresolved Root_unresolved 153 5.63e-44   NR CAB4133097.1 2100421 g13409 i0 50.7 2.20725388601036 150 70 76.7 3 566 123 1 148 CAB4133097.1 HNHc domain containing protein [uncultured Caudovirales phage] diamond 1278 154 0.993506493506494 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
28051166 28051166 PRJNA1166865_P_NODE_1925_length_1295_cov_3.756137_g1833_i0 PRJNA1166865 1925 1295 3.756137 48.64197415 Kaumoebavirus 1859492 Viruses Viruses 54.7 7.75e-4   NR QQV29711.1 1859492 g1833 i0 23.7 0.646332046332046 279 144 58.4 10 1104 349 513 749 QQV29711.1 flagellar motor rotation protein [Kaumoebavirus] diamond 837 54.7 1 Viruses               Kaumoebavirus
30071990 30071990 PRJNA1166865_P_NODE_88052_length_244_cov_1.789474_g87811_i0 PRJNA1166865 88052 244 1.789474 4.36631656 Fadolivirus algeromassiliense 3060017 Viruses Viruses 86.7 3.41e-19   NR YP_010804033.1 3060017 g87811 i0 53.3 0.922131147540984 75 35 92.2 0 242 18 81 155 YP_010804033.1 mitochondrial 18kda protein [Fadolivirus algeromassiliense] diamond 225 86.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
30103522 30103522 PRJNA1166865_P_NODE_75132_length_251_cov_0.865169_g74891_i0 PRJNA1166865 75132 251 0.865169 2.17157419 Caudoviricetes sp. 2832643 Viruses Viruses 43.5 0.0215   NR XOR46424.1 2832643 g74891 i0 34.2 1.74501992031873 73 46 86.1 2 226 11 379 450 XOR46424.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 438 43.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30325373 30325373 PRJNA1166865_P_NODE_27132_length_413_cov_1.170588_g26891_i0 PRJNA1166865 27132 413 1.170588 4.83452844 TTV-like mini virus 93678 Viruses Viruses 44.7 0.0465   NR UGV38236.1 93678 g26891 i0 31.8 0.617433414043584 85 49 56.7 2 180 413 385 467 UGV38236.1 MAG: ORF1 [TTV-like mini virus] diamond 255 44.7 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae Betatorquevirus TTV-like mini virus
30546008 30546008 PRJNA1166865_P_NODE_68413_length_266_cov_1.595855_g68172_i0 PRJNA1166865 68413 266 1.595855 4.2449743 Sylvanvirus sp. 2487774 Viruses Viruses 70.5 2.06e-12   NR AYV86745.1 2487774 g68172 i0 50 0.744360902255639 66 33 74.4 0 1 198 86 151 AYV86745.1 MAG: hypothetical protein Sylvanvirus8_1, partial [Sylvanvirus sp.] diamond 198 70.5 1 Viruses               Sylvanvirus sp.
31070932 31070932 PRJNA1166865_P_NODE_93775_length_241_cov_1.375000_g93534_i0 PRJNA1166865 93775 241 1.375 3.31375 root 1 Root_unresolved Root_unresolved 104 2.18e-24   NR CAH6419174.1 340016 g93534 i0 68.4 3.93360995850622 79 24 98.3 1 239 3 139 216 CAH6419174.1 S-adenosylmethionine synthetase [uncultured virus] diamond 948 105 0.990476190476191 Viruses               uncultured virus
31145844 31145844 PRJNA1166865_P_NODE_12835_length_597_cov_1.078244_g12601_i0 PRJNA1166865 12835 597 1.078244 6.43711668 Fadolivirus algeromassiliense 3060017 Viruses Viruses 147 9.1e-40   NR YP_010802970.1 3060017 g12601 i0 61 0.592964824120603 118 43 58.8 2 356 6 1 116 YP_010802970.1 rhamnose synthesis protein [Fadolivirus algeromassiliense] diamond 354 147 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
31399470 31399470 PRJNA1166865_P_NODE_70556_length_261_cov_1.622340_g70315_i0 PRJNA1166865 70556 261 1.62234 4.2343074 Edafosvirus sp. 2487765 Viruses Viruses 98.2 1.4500000000000002e-21   NR AYV78949.1 2487765 g70315 i0 53.1 0.931034482758621 81 38 93.1 0 248 6 520 600 AYV78949.1 MAG: hypothetical protein Edafosvirus57_2, partial [Edafosvirus sp.] diamond 243 98.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.
31399485 31399485 PRJNA1166865_P_NODE_88196_length_244_cov_1.350877_g87955_i0 PRJNA1166865 88196 244 1.350877 3.29613988 Solumvirus sp. 2487773 Viruses Viruses 55.1 9.61e-7   NR AYV86227.1 2487773 g87955 i0 36.7 1.95491803278689 79 47 93.4 2 230 3 30 108 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 477 55.1 1 Viruses Pithoviruses             Solumvirus sp.
31462767 31462767 PRJNA1166865_P_NODE_43156_length_333_cov_1.776923_g42915_i0 PRJNA1166865 43156 333 1.776923 5.91715359 Tupanvirus soda lake 2126985 Viruses Viruses 62 1.71e-8   NR YP_010781729.1 2126985 g42915 i0 43.1 2.54954954954955 72 41 64.9 0 242 27 18 89 YP_010781729.1 serine-tRNA synthetase [Tupanvirus soda lake] diamond 849 62 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
31652140 31652140 PRJNA1166865_P_NODE_5277_length_894_cov_2.700365_g5096_i0 PRJNA1166865 5277 894 2.700365 24.1412631 Harvfovirus sp. 2487768 Viruses Viruses 124 6.38e-31   NR AYV81692.1 2487768 g5096 i0 43.7 0.422818791946309 126 69 42.3 1 827 450 13 136 AYV81692.1 MAG: putative eukaryotic translation initiation factor 5A-1 [Harvfovirus sp.] diamond 378 124 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Harvfovirus sp.
31905316 31905316 PRJNA1166865_P_NODE_46017_length_324_cov_1.219124_g45776_i0 PRJNA1166865 46017 324 1.219124 3.94996176 Solumvirus sp. 2487773 Viruses Viruses 58.9 1.92e-7   NR AYV86402.1 2487773 g45776 i0 36.5 0.685185185185185 74 42 68.5 1 270 49 26 94 AYV86402.1 MAG: hypothetical protein Solumvirus9_2 [Solumvirus sp.] diamond 222 58.9 1 Viruses Pithoviruses             Solumvirus sp.
32475074 32475074 PRJNA1166865_P_NODE_33639_length_373_cov_1.026667_g33398_i0 PRJNA1166865 33639 373 1.026667 3.82946791 Barrevirus sp. 2487763 Viruses Viruses 132 2.09e-34   NR AYV77211.1 2487763 g33398 i0 56.1 0.989276139410188 123 51 98.9 3 370 2 212 331 AYV77211.1 MAG: hypothetical protein Barrevirus19_6 [Barrevirus sp.] diamond 369 132 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Barrevirus sp.
32506784 32506784 PRJNA1166865_P_NODE_8659_length_718_cov_5.568992_g8444_i0 PRJNA1166865 8659 718 5.568992 39.98536256 Solumvirus sp. 2487773 Viruses Viruses 232 3.77e-73   NR AYV86227.1 2487773 g8444 i0 80.6 0.601671309192201 144 28 60.2 0 104 535 41 184 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 432 232 1 Viruses Pithoviruses             Solumvirus sp.
32506790 32506790 PRJNA1166865_P_NODE_92299_length_242_cov_0.911243_g92058_i0 PRJNA1166865 92299 242 0.911243 2.20520806 Sylvanvirus sp. 2487774 Viruses Viruses 46.2 0.00109   NR AYV87113.1 2487774 g92058 i0 35.4 0.805785123966942 65 36 73.1 1 180 4 1 65 AYV87113.1 MAG: hypothetical protein Sylvanvirus26_3 [Sylvanvirus sp.] diamond 195 46.2 1 Viruses               Sylvanvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;