RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1166865" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1166865 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27261824 27261824 PRJNA1166865_P_NODE_51123_length_309_cov_0.927966_g50882_i0 PRJNA1166865 51123 309 0.927966 2.86741494 Thermoplasmata archaeon 1906666 Archaea Archaea 52.8 2.55e-5   NR MDD4307948.1 1906666 g50882 i0 35.7 0.679611650485437 70 41 68 1 282 73 494 559 MDD4307948.1 cadherin-like beta sandwich domain-containing protein [Thermoplasmata archaeon] diamond 210 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29471741 29471741 PRJNA1166865_P_NODE_74150_length_253_cov_1.227778_g73909_i0 PRJNA1166865 74150 253 1.227778 3.10627834 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 48.1 2.72e-4   NR HIF04094.1 2163009 g73909 i0 60.6 1.28063241106719 33 13 39.1 0 54 152 93 125 HIF04094.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 324 48.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;