RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1166865" and tax_phylum = "Commensaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Commensaviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1166865 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30325373 30325373 PRJNA1166865_P_NODE_27132_length_413_cov_1.170588_g26891_i0 PRJNA1166865 27132 413 1.170588 4.83452844 TTV-like mini virus 93678 Viruses Viruses 44.7 0.0465   NR UGV38236.1 93678 g26891 i0 31.8 0.617433414043584 85 49 56.7 2 180 413 385 467 UGV38236.1 MAG: ORF1 [TTV-like mini virus] diamond 255 44.7 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae Betatorquevirus TTV-like mini virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;