RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1166865" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1166865 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28259696 28259696 PRJNA1166865_P_NODE_54946_length_298_cov_1.368889_g54705_i0 PRJNA1166865 54946 298 1.368889 4.07928922 Bacteria 2 Bacteria Bacteria 53.5 1.16e-5   NR MBI3816717.1 2030811 g54705 i0 53.2 2.02348993288591 47 22 47.3 0 151 291 275 321 MBI3816717.1 choice-of-anchor A family protein [Candidatus Peregrinibacteria bacterium] diamond 603 53.9 0.992578849721707 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
29156548 29156548 PRJNA1166865_P_NODE_77669_length_250_cov_0.870056_g77428_i0 PRJNA1166865 77669 250 0.870056 2.17514 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 54.3 3.33e-6   NR MFH0770375.1 2030811 g77428 i0 39.5 0.972 81 45 96 3 9 248 559 636 MFH0770375.1 S-layer homology domain-containing protein [Candidatus Peregrinibacteria bacterium] diamond 243 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
30703946 30703946 PRJNA1166865_P_NODE_88074_length_244_cov_1.736842_g87833_i0 PRJNA1166865 88074 244 1.736842 4.23789448 Candidatus Peregrinibacteria bacterium CG_4_9_14_ 2030811 Bacteria Bacteria 91.3 2.72e-19   NR PJC37039.1 1974780 g87833 i0 56.4 0.959016393442623 78 34 95.9 0 244 11 213 290 PJC37039.1 MAG: hypothetical protein CO046_02525 [Candidatus Peregrinibacteria bacterium CG_4_9_14_0_2_um_filter_53_11] diamond 234 91.3 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium CG_4_9_14_0_2_um_filter_53_11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;