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contig_metadata

16 rows where bioproject = "PRJNA1166865" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1166865 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11790717 11790717 PRJNA1166865_P_NODE_1270_length_1468_cov_2.275986_g1196_i0 PRJNA1166865 1270 1468 2.275986 33.41147448 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 60.2 0.001   NTclustered gi|2874253689|emb|OY969415.1| 157466 g1196 i0 100 0.0415531335149864 32 0 2 0 51 82 1043271 1043240 MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 blastn 61 60.2 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
15616907 15616907 PRJNA1166865_P_NODE_95213_length_241_cov_0.916667_g94972_i0 PRJNA1166865 95213 241 0.916667 2.20916747 Armatimonadota bacterium 2033014 Bacteria Bacteria 122 1.82e-30   NR MCC2672380.1 2033014 g94972 i0 73.8 0.995850622406639 80 20 99.6 1 241 2 160 238 MCC2672380.1 NADH-quinone oxidoreductase subunit [Armatimonadota bacterium] diamond 240 122 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27482906 27482906 PRJNA1166865_P_NODE_75843_length_251_cov_0.865169_g75602_i0 PRJNA1166865 75843 251 0.865169 2.17157419 Armatimonadota bacterium 2033014 Bacteria Bacteria 154 2.9299999999999997e-45   NR MCC2672294.1 2033014 g75602 i0 96.3 0.9800796812749 82 3 98 0 5 250 5 86 MCC2672294.1 transporter [Armatimonadota bacterium] diamond 246 154 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27691897 27691897 PRJNA1166865_P_NODE_54184_length_300_cov_1.356828_g53943_i0 PRJNA1166865 54184 300 1.356828 4.070484 PVC group 1783257 Bacteria Bacteria 152 2.15e-41   NR MBI1756269.1 1005039 g53943 i0 76.8 17.75 99 21 99 1 298 2 109 205 MBI1756269.1 MmgE/PrpD family protein [Fimbriimonas ginsengisoli] diamond 5325 153 0.993464052287582 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
28398522 28398522 PRJNA1166865_P_NODE_85566_length_246_cov_0.890173_g85325_i0 PRJNA1166865 85566 246 0.890173 2.18982558 Armatimonas sp. 1872638 Bacteria Bacteria 130 2.7e-34   NR WP_395137629.1 1872638 g85325 i0 72.8 1.97560975609756 81 22 98.8 0 244 2 262 342 WP_395137629.1 endo-1,4-beta-xylanase [Armatimonas sp.] diamond 486 130 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
28430223 28430223 PRJNA1166865_P_NODE_76306_length_251_cov_0.865169_g76065_i0 PRJNA1166865 76306 251 0.865169 2.17157419 Armatimonadota bacterium 2033014 Bacteria Bacteria 52 2.2e-5   NR MBI1333310.1 2033014 g76065 i0 36.5 0.884462151394422 74 44 86.1 2 217 2 45 117 MBI1333310.1 serine hydrolase [Armatimonadota bacterium] diamond 222 52 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28935351 28935351 PRJNA1166865_P_NODE_50468_length_310_cov_2.620253_g50227_i0 PRJNA1166865 50468 310 2.620253 8.1227843 Armatimonadota bacterium 2033014 Bacteria Bacteria 75.5 2.37e-13   NR MBM3460984.1 2033014 g50227 i0 68.8 7.25806451612903 48 15 46.5 0 167 310 28 75 MBM3460984.1 citrate synthase [Armatimonadota bacterium] diamond 2250 75.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29125009 29125009 PRJNA1166865_P_NODE_31909_length_382_cov_1.446602_g31668_i0 PRJNA1166865 31909 382 1.446602 5.52601964 Armatimonadetes bacterium CG_4_1 2033014 Bacteria Bacteria 209 3.52e-62   NR PIY44557.1 1973909 g31668 i0 100 0.99738219895288 127 0 99.7 0 382 2 336 462 PIY44557.1 MAG: hypothetical protein COZ05_07900 [Armatimonadetes bacterium CG_4_10_14_3_um_filter_59_10] diamond 381 209 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium CG_4_10_14_3_um_filter_59_10
29377307 29377307 PRJNA1166865_P_NODE_60609_length_284_cov_1.459716_g60368_i0 PRJNA1166865 60609 284 1.459716 4.14559344 Armatimonadota bacterium 2033014 Bacteria Bacteria 49.7 1.64e-4   NR MBI3911130.1 2033014 g60368 i0 34.4 0.982394366197183 93 56 98.2 1 280 2 19 106 MBI3911130.1 aquaporin [Armatimonadota bacterium] diamond 279 49.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29617232 29617232 PRJNA1166865_P_NODE_55690_length_296_cov_1.381166_g55449_i0 PRJNA1166865 55690 296 1.381166 4.08825136 Bacillati 1783272 Bacteria Bacteria 75.1 2.02e-14   NR MBM3461008.1 2033014 g55449 i0 42.7 3.22297297297297 96 52 97.3 1 289 2 9 101 MBM3461008.1 superoxide dismutase family protein [Armatimonadota bacterium] diamond 954 75.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30439097 30439097 PRJNA1166865_P_NODE_79433_length_249_cov_0.875000_g79192_i0 PRJNA1166865 79433 249 0.875 2.17875 PVC group 1783257 Bacteria Bacteria 107 6.51e-25   NR MBS1726118.1 2033014 g79192 i0 64.6 2.96385542168675 82 26 98.8 1 3 248 341 419 MBS1726118.1 MmgE/PrpD family protein [Armatimonadota bacterium] diamond 738 108 0.990740740740741 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30640655 30640655 PRJNA1166865_P_NODE_79353_length_249_cov_0.875000_g79112_i0 PRJNA1166865 79353 249 0.875 2.17875 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 47.8 6.4e-4   NR HWP31976.1 2682145 g79112 i0 52 1.6144578313253 50 23 60.2 1 100 249 2 50 HWP31976.1 translation elongation factor Ts [Fimbriimonadales bacterium] diamond 402 47.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
30767199 30767199 PRJNA1166865_P_NODE_65174_length_274_cov_1.283582_g64933_i0 PRJNA1166865 65174 274 1.283582 3.51701468 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 107 5.73e-26   NR HRK20277.1 2682144 g64933 i0 59.6 0.974452554744526 89 36 97.4 0 2 268 212 300 HRK20277.1 helix-turn-helix domain-containing GNAT family N-acetyltransferase [Fimbriimonadaceae bacterium] diamond 267 107 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
31335914 31335914 PRJNA1166865_P_NODE_62456_length_280_cov_1.468599_g62215_i0 PRJNA1166865 62456 280 1.468599 4.1120772 Armatimonadota bacterium 2033014 Bacteria Bacteria 98.6 1.2699999999999999e-23   NR MDQ3812449.1 2033014 g62215 i0 57 1.71428571428571 79 34 84.6 0 278 42 97 175 MDQ3812449.1 TlpA family protein disulfide reductase [Armatimonadota bacterium] diamond 480 98.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32475077 32475077 PRJNA1166865_P_NODE_39659_length_346_cov_1.128205_g39418_i0 PRJNA1166865 39659 346 1.128205 3.9035893 Chthonomonadales bacterium 2282151 Bacteria Bacteria 47.4 0.00256   NR MEP6754703.1 2282151 g39418 i0 42.6 0.468208092485549 54 24 40.8 2 1 141 58 111 MEP6754703.1 WD40 repeat domain-containing protein [Chthonomonadales bacterium] diamond 162 47.4 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
32853155 32853155 PRJNA1166865_P_NODE_93760_length_241_cov_1.375000_g93519_i0 PRJNA1166865 93760 241 1.375 3.31375 Armatimonadota bacterium 2033014 Bacteria Bacteria 86.3 1.17e-18   NR HOS93190.1 2033014 g93519 i0 52.6 1.9045643153527 78 37 97.1 0 239 6 44 121 HOS93190.1 adenylate kinase [Armatimonadota bacterium] diamond 459 86.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;